style: apply rustfmt to backend codebase
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- Apply rustfmt to all Rust source files in backend/
- Fix trailing whitespace inconsistencies
- Standardize formatting across handlers, models, and services
- Improve code readability with consistent formatting

These changes are purely stylistic and do not affect functionality.
All CI checks now pass with proper formatting.
This commit is contained in:
goose 2026-03-11 11:16:03 -03:00
parent 6b7e4d4016
commit ee0feb77ef
41 changed files with 1266 additions and 819 deletions

View file

@ -1,7 +1,7 @@
//! Ingredient Mapper Service
//!
//!
//! Maps EU drug names to US drug names for interaction checking
//!
//!
//! Example:
//! - Paracetamol (EU) → Acetaminophen (US)
@ -15,16 +15,16 @@ pub struct IngredientMapper {
impl IngredientMapper {
pub fn new() -> Self {
let mut mappings = HashMap::new();
// EU to US drug name mappings
mappings.insert("paracetamol".to_string(), "acetaminophen".to_string());
mappings.insert("paracetamolum".to_string(), "acetaminophen".to_string());
mappings.insert("acetylsalicylic acid".to_string(), "aspirin".to_string());
// Antibiotics
mappings.insert("amoxicilline".to_string(), "amoxicillin".to_string());
mappings.insert("amoxicillinum".to_string(), "amoxicillin".to_string());
// These are the same in both
mappings.insert("ibuprofen".to_string(), "ibuprofen".to_string());
mappings.insert("metformin".to_string(), "metformin".to_string());
@ -32,26 +32,25 @@ impl IngredientMapper {
mappings.insert("atorvastatin".to_string(), "atorvastatin".to_string());
mappings.insert("simvastatin".to_string(), "simvastatin".to_string());
mappings.insert("omeprazole".to_string(), "omeprazole".to_string());
Self { mappings }
}
/// Map EU drug name to US drug name
pub fn map_to_us(&self, eu_name: &str) -> String {
let normalized = eu_name.to_lowercase().trim().to_string();
self.mappings.get(&normalized)
self.mappings
.get(&normalized)
.unwrap_or(&eu_name.to_string())
.clone()
}
/// Map multiple EU drug names to US names
pub fn map_many_to_us(&self, eu_names: &[String]) -> Vec<String> {
eu_names.iter()
.map(|name| self.map_to_us(name))
.collect()
eu_names.iter().map(|name| self.map_to_us(name)).collect()
}
/// Add a custom mapping
pub fn add_mapping(&mut self, eu_name: String, us_name: String) {
self.mappings.insert(eu_name.to_lowercase(), us_name);
@ -67,19 +66,19 @@ impl Default for IngredientMapper {
#[cfg(test)]
mod tests {
use super::*;
#[test]
fn test_paracetamol_mapping() {
let mapper = IngredientMapper::new();
assert_eq!(mapper.map_to_us("paracetamol"), "acetaminophen");
}
#[test]
fn test_same_name() {
let mapper = IngredientMapper::new();
assert_eq!(mapper.map_to_us("ibuprofen"), "ibuprofen");
}
#[test]
fn test_case_insensitive() {
let mapper = IngredientMapper::new();

View file

@ -1,12 +1,11 @@
//! Interaction Service
//!
//!
//! Combines ingredient mapping and OpenFDA interaction checking
//! Provides a unified API for checking drug interactions
use crate::services::{
IngredientMapper,
OpenFDAService,
openfda_service::{DrugInteraction, InteractionSeverity}
openfda_service::{DrugInteraction, InteractionSeverity},
IngredientMapper, OpenFDAService,
};
use mongodb::bson::oid::ObjectId;
use serde::{Deserialize, Serialize};
@ -23,56 +22,65 @@ impl InteractionService {
fda: OpenFDAService::new(),
}
}
/// Check interactions between EU medications
/// Maps EU names to US names, then checks interactions
pub async fn check_eu_medications(
&self,
eu_medications: &[String]
eu_medications: &[String],
) -> Result<Vec<DrugInteraction>, Box<dyn std::error::Error>> {
// Step 1: Map EU names to US names
let us_medications: Vec<String> = self.mapper.map_many_to_us(eu_medications);
// Step 2: Check interactions using US names
let interactions = self.fda.check_interactions(&us_medications).await?;
// Step 3: Map back to EU names in response
let interactions_mapped: Vec<DrugInteraction> = interactions
.into_iter()
.map(|mut interaction| {
// Map US names back to EU names if they were mapped
for (i, eu_name) in eu_medications.iter().enumerate() {
if us_medications.get(i).map(|us| us == &interaction.drug1).unwrap_or(false) {
if us_medications
.get(i)
.map(|us| us == &interaction.drug1)
.unwrap_or(false)
{
interaction.drug1 = eu_name.clone();
}
if us_medications.get(i).map(|us| us == &interaction.drug2).unwrap_or(false) {
if us_medications
.get(i)
.map(|us| us == &interaction.drug2)
.unwrap_or(false)
{
interaction.drug2 = eu_name.clone();
}
}
interaction
})
.collect();
Ok(interactions_mapped)
}
/// Check a single medication against user's current medications
pub async fn check_new_medication(
&self,
new_medication: &str,
existing_medications: &[String]
existing_medications: &[String],
) -> Result<DrugInteractionCheckResult, Box<dyn std::error::Error>> {
let all_meds = {
let mut meds = vec![new_medication.to_string()];
meds.extend_from_slice(existing_medications);
meds
};
let interactions = self.check_eu_medications(&all_meds).await?;
let has_severe = interactions.iter()
let has_severe = interactions
.iter()
.any(|i| matches!(i.severity, InteractionSeverity::Severe));
Ok(DrugInteractionCheckResult {
interactions,
has_severe,
@ -97,32 +105,32 @@ pub struct DrugInteractionCheckResult {
#[cfg(test)]
mod tests {
use super::*;
#[tokio::test]
async fn test_paracetamol_warfarin() {
let service = InteractionService::new();
// Test EU name mapping + interaction check
let result = service
.check_eu_medications(&["paracetamol".to_string(), "warfarin".to_string()])
.await
.unwrap();
// Paracetamol maps to acetaminophen, should check against warfarin
// (Note: actual interaction depends on our known interactions database)
println!("Interactions found: {:?}", result);
}
#[tokio::test]
async fn test_new_medication_check() {
let service = InteractionService::new();
let existing = vec!["warfarin".to_string()];
let result = service
.check_new_medication("aspirin", &existing)
.await
.unwrap();
// Warfarin + Aspirin should have severe interaction
assert_eq!(result.interactions.len(), 1);
assert!(result.has_severe);

View file

@ -1,14 +1,14 @@
//! Phase 2.8 Services Module
//!
//!
//! This module contains external service integrations:
//! - Ingredient Mapper (EU to US drug names)
//! - OpenFDA Service (drug interactions)
//! - Interaction Checker (combined service)
pub mod ingredient_mapper;
pub mod openfda_service;
pub mod interaction_service;
pub mod openfda_service;
pub use ingredient_mapper::IngredientMapper;
pub use openfda_service::OpenFDAService;
pub use interaction_service::InteractionService;
pub use openfda_service::OpenFDAService;