alvaro/normogen
1
0
Fork 0
Code Issues 2 Pull requests Projects Releases Packages Wiki Activity Actions

docs: reconcile documentation with reality (P3)

Browse source 
Make the project's documentation match the code and remove the sprawl. The docs
claimed Phase 2.8 (drug interactions) was 'planning/0%' and the backend '~91%
complete' — both wrong: 2.8 is implemented and live, plus the P0/P1 security
and test work is done. Five root CI/CD docs described a 'docker-build' CI job
that was removed; ~18 backend/ status snapshots and ~24 docs/implementation
duplicates cluttered the tree.

Deletions (85 files):
- Root: 4 stale CI/CD reports (CI-CD-{COMPLETION-REPORT,IMPLEMENTATION-SUMMARY,
  STATUS-REPORT,FINAL-STATUS}.md) — all describe the removed docker-build job.
- backend/: 18 phase/build/fix snapshots and code-dump .txt files.
- docs/: the 3 one-time reorg reports; ~17 docs/implementation duplicates and
  process artifacts; 4 stale docs/development CI docs + git snapshots;
  redundant deployment/testing files.
- thoughts/: STATUS.md (said Phase 2.4 in-progress), superseded phase notes and
  duplicative research inputs. tmp/ (928KB of CI debug logs, gitignored).

Moves (18 files):
- 9 genuine decision records -> docs/adr/ (Architecture Decision Records),
  date-prefixes stripped, with an index README.
- 8 historical-but-valuable phase plans/specs + the old CI-CD-FINAL-SOLUTION ->
  docs/archive/ (now-populated, with a README explaining it's superseded
  material). thoughts/ tree removed.

Rewrites (13 files) to match reality:
- Drop the fake '% complete' figures everywhere in favor of Implemented /
  In-Progress / Planned with concrete endpoint/feature lists.
- Phase 2.8 -> Implemented; add /api/interactions/* and /api/auth/{refresh,
  logout} to the endpoint lists; fix 'Rust 1.93' -> edition 2021.
- Add a Security section (token_version validation, hashed refresh-token
  persistence, fail-fast config, real-IP audit) and correct the test-coverage
  and deployment claims to reality.
- New canonical docs/development/CI-CD.md (4 jobs: format/clippy/build/test,
  mongo service, no docker-build + why).
- README, docs/README, product/{STATUS,ROADMAP,PROGRESS,README,introduction},
  implementation/README, development/README, testing/README, AI_AGENT_GUIDE,
  .cursorrules, .gooserules all updated.

Verified: greps for 'Phase 2.8 (Planning)', 'PLANNING (0%)', 'Rust 1.93',
'91%/10%/85% complete', and 'docker-build' return nothing outside docs/archive;
all internal doc links resolve; backend/src untouched (cargo build clean).
This commit is contained in:
goose 2026-06-27 16:02:16 -03:00
parent bd1b7c2925
commit 17efc4f656
119 changed files with 469 additions and 17801 deletions
Download patch file Download diff file Expand all files Collapse all files

12
docs/AI_AGENT_GUIDE.md
View file

@ -82,7 +82,7 @@ normogen/
### Backend Architecture
#### Technology Stack
- **Language**: Rust 1.93
- **Language**: Rust (edition 2021)
- **Web Framework**: Axum 0.7 (async, tower-based)
- **Database**: MongoDB 7.0
- **Authentication**: JWT (jsonwebtoken 9)
@ -375,10 +375,12 @@ docker compose -f docker-compose.prod.yml up -d
- Lab results storage
- OpenFDA integration for drug data
### In Progress 🚧
- Drug interaction checking (Phase 2.8)
- Automated reminder system
- Frontend integration with backend
### Implemented ✅
- Drug interaction checking (Phase 2.8) — `/api/interactions/check`, `/check-new`
### In Progress / Not Started 🚧
- Automated reminder system (Phase 2.8 stretch)
- Frontend integration with backend (Phase 3)
### Planned 📋
- Medication refill tracking

253
docs/COMPLETION_REPORT.md
View file

@ -1,253 +0,0 @@
# Documentation Tasks - Completion Report
**Date**: 2026-03-09
**Task**: Analyze project, reorganize documentation, add AI agent guides
**Status**: ✅ COMPLETE
---
## 📋 Tasks Completed
### Task 1: Project Analysis
✅ Analyzed Normogen monorepo structure
- Backend: Rust + Axum + MongoDB
- Frontend: React + TypeScript + Material-UI
- Current Phase: 2.8 (Drug Interactions)
- Backend: ~91% complete, Frontend: ~10% complete
### Task 2: Documentation Reorganization
✅ Reorganized 71 documentation files into logical folders
**Structure Created**:
```
docs/
├── product/ (5 files) - Project overview, roadmap, status
├── implementation/ (36 files) - Phase plans, specs, progress
├── testing/ (9 files) - Test scripts, results
├── deployment/ (11 files) - Deployment guides, scripts
├── development/ (10 files) - Git workflow, CI/CD
├── archive/ (0 files) - For future use
└── README.md (index) - Main documentation index
```
**Files Created**:
- docs/README.md (main index)
- docs/product/README.md
- docs/implementation/README.md
- docs/testing/README.md
- docs/deployment/README.md
- docs/development/README.md
- docs/REORGANIZATION_SUMMARY.md
**Results**:
- ✅ Zero documentation files in root directory
- ✅ All files organized by purpose
- ✅ Navigation guides created for all directories
- ✅ Cross-references and links added
### Task 3: AI Agent Documentation
✅ Created comprehensive AI agent documentation suite
**Files Created**:
1. **docs/AI_AGENT_GUIDE.md** (17KB)
- Quick start overview
- Repository structure
- Key concepts (backend/frontend architecture)
- Common workflows with code examples
- Testing, deployment, security guidelines
- AI agent-specific tips and checklists
2. **docs/AI_QUICK_REFERENCE.md** (2.5KB)
- Essential commands
- Key file locations
- Code patterns
- Current status
3. **.cursorrules** (8.5KB)
- Project rules for AI IDEs (Cursor, Copilot)
- Code style rules (Rust & TypeScript)
- Authentication, API design, testing rules
- Common patterns and checklists
4. **.gooserules** (3.5KB)
- Goose-specific rules and workflows
- Tool usage patterns
- Task management guidelines
- Project-specific context
5. **docs/AI_DOCS_SUMMARY.md**
- Explanation of all AI documentation
- How to use each document
- Learning paths
- Maintenance guidelines
6. **docs/FINAL_SUMMARY.md**
- Complete overview of all work done
- Statistics and impact
- Next steps
---
## 📊 Impact Summary
### Documentation Reorganization
- Files moved: 71
- Directories created: 6
- README files: 6
- Time: ~15 minutes
- Root files before: 71
- Root files after: 0
### AI Agent Documentation
- Files created: 5
- Total size: ~31.5KB
- Time: ~20 minutes
- Coverage: Complete (quick ref to comprehensive)
### Total Impact
- **Total files organized/created**: 82
- **Total documentation**: ~40KB
- **Total time**: ~35 minutes
- **Repository cleanliness**: 100% (0 docs in root)
---
## ✅ Success Criteria - All Met
### Documentation Reorganization
- [x] All documentation files moved from root
- [x] Logical folder structure created
- [x] README files for navigation
- [x] Cross-references added
- [x] Root README updated
- [x] Zero clutter in root
### AI Agent Documentation
- [x] Comprehensive guide created
- [x] Quick reference available
- [x] Project rules for AI IDEs
- [x] Goose-specific rules
- [x] Summary documentation
- [x] Integrated into docs/ structure
---
## 🎯 Benefits Achieved
### For the Project
✅ Clean, organized repository
✅ Logical documentation structure
✅ Better navigation and discoverability
✅ Improved onboarding experience
✅ Easier long-term maintenance
### For AI Agents
✅ Faster onboarding (5 min to understand project)
✅ Consistent code patterns and conventions
✅ Fewer errors (avoid common pitfalls)
✅ Better context (what's implemented/planned)
✅ Proper testing workflows
✅ Good commit message practices
### For Human Developers
✅ Easier AI collaboration
✅ Clear convention documentation
✅ Quick reference for common tasks
✅ Better project understanding
✅ Maintainable codebase standards
---
## 📁 Key Files Reference
### Main Documentation
- **[docs/README.md](./README.md)** - Documentation index
- **[docs/AI_AGENT_GUIDE.md](./AI_AGENT_GUIDE.md)** - Comprehensive AI guide
- **[docs/AI_QUICK_REFERENCE.md](./AI_QUICK_REFERENCE.md)** - Quick reference
- **[docs/FINAL_SUMMARY.md](./FINAL_SUMMARY.md)** - Complete work summary
### AI Agent Rules
- **[.cursorrules](../.cursorrules)** - Project rules for AI IDEs
- **[.gooserules](../.gooserules)** - Goose-specific rules
### Organized Documentation
- **[docs/product/](./product/)** - Product overview, roadmap, status
- **[docs/implementation/](./implementation/)** - Phase plans, specs, progress
- **[docs/testing/](./testing/)** - Test scripts, results
- **[docs/deployment/](./deployment/)** - Deployment guides, scripts
- **[docs/development/](./development/)** - Git workflow, CI/CD
---
## 🚀 Next Steps
### Immediate (Ready to Commit)
```bash
git add .
git commit -m "docs(ai): reorganize documentation and add AI agent guides
- Reorganize 71 docs into logical folders (product, implementation, testing, deployment, development)
- Add comprehensive AI agent documentation (17KB guide + 2.5KB quick reference)
- Add .cursorrules for AI IDE assistants (Cursor, Copilot, etc.)
- Add .gooserules for goose agent
- Create README files for all documentation directories
- Update root README to point to organized structure
Benefits:
- Clean repository root (0 docs in root)
- Better navigation and discoverability
- AI agents can work more effectively
- Improved onboarding for new contributors"
```
### Post-Commit Actions
1. **Verify AI agent integration**:
- Test with Cursor/Copilot to ensure .cursorrules is read
- Test with goose to ensure .gooserules is followed
2. **Review documentation**:
- Check all links work
- Verify no important info is missing
- Get feedback from other contributors
3. **Maintain going forward**:
- Keep AI docs updated with architecture changes
- Update phase docs as progress is made
- Archive old documents when appropriate
---
## 📊 Statistics
| Metric | Value |
|--------|-------|
| Documentation files moved | 71 |
| Directories created | 6 |
| README files created | 6 |
| AI documentation files | 5 |
| Total documentation size | ~40KB |
| Time to complete | ~35 minutes |
| Root files before | 71 |
| Root files after | 0 |
| Repository cleanliness | 100% |
---
## ✅ Completion Status
**Overall Status**: ✅ COMPLETE
**Documentation Reorganization**: ✅ COMPLETE
**AI Agent Documentation**: ✅ COMPLETE
**Ready to Commit**: ✅ YES
---
**Completed**: 2026-03-09
**Total Time**: ~35 minutes
**Files Organized**: 71
**Files Created**: 11
**Documentation Added**: ~40KB
---
*All tasks completed successfully. Repository is ready for commit.*

319
docs/FINAL_SUMMARY.md
View file

@ -1,319 +0,0 @@
# Documentation Reorganization - Complete Summary
**Date**: 2026-03-09
**Tasks**:
1. Reorganize project documentation into logical folders
2. Create AI agent documentation for better repository navigation
---
## ✅ Part 1: Documentation Reorganization
### What Was Done
Moved **71 files** from the root directory into an organized structure under `docs/`.
### New Structure
```
docs/
├── product/ (5 files) - Project overview, roadmap, status
├── implementation/ (36 files) - Phase plans, specs, progress reports
├── testing/ (9 files) - Test scripts and results
├── deployment/ (11 files) - Deployment guides and scripts
├── development/ (10 files) - Git workflow, CI/CD
├── archive/ (0 files) - For future archival
└── README.md (index) - Main documentation index
```
### Files Created
- `docs/README.md` - Main documentation index
- `docs/product/README.md` - Product documentation guide
- `docs/implementation/README.md` - Implementation docs with phase tracking
- `docs/testing/README.md` - Testing documentation and scripts guide
- `docs/deployment/README.md` - Deployment guides and procedures
- `docs/development/README.md` - Development workflow and tools
- `docs/REORGANIZATION_SUMMARY.md` - Details of the reorganization
### Benefits
✅ Zero clutter in root directory
✅ Logical categorization by purpose
✅ Better navigation with README files
✅ Improved onboarding for new contributors
✅ Easier maintenance
---
## ✅ Part 2: AI Agent Documentation
### What Was Created
A comprehensive documentation suite to help AI agents (and humans) work effectively in this repository.
### Files Created
#### 1. **docs/AI_AGENT_GUIDE.md** (17KB)
Comprehensive guide covering:
- Quick start overview
- Repository structure
- Key concepts (backend/frontend architecture)
- Common workflows with code examples
- Running tests
- Deployment procedures
- Security guidelines
- Current implementation status
- Development guidelines
- AI agent-specific tips
- Checklists for AI agents
#### 2. **docs/AI_QUICK_REFERENCE.md** (2.5KB)
Essential commands and patterns:
- Essential commands (build, test, run)
- Key file locations
- Code patterns
- Current status
- Important warnings
#### 3. **.cursorrules** (8.5KB)
Project rules that AI IDEs automatically read:
- Project overview
- Technology stack
- File structure rules
- Code style rules (Rust & TypeScript)
- Authentication rules
- API design rules
- Testing rules
- Security rules
- Commit rules
- Common patterns
- Before committing checklist
#### 4. **.gooserules** (3.5KB)
Goose-specific rules and workflows:
- Agent configuration
- Tool usage patterns
- Task management
- Project-specific context
- Common workflows
- Testing guidelines
- Commit guidelines
#### 5. **docs/AI_DOCS_SUMMARY.md**
This summary file explaining:
- What documentation was created
- How to use each document
- Quick decision tree
- Key information for AI agents
- Learning paths
- Maintenance guidelines
---
## 📊 Statistics
### Documentation Reorganization
- Files moved: 71
- Directories created: 6
- README files created: 6
- Files remaining in root: 0
- Time to complete: ~15 minutes
### AI Agent Documentation
- Files created: 5
- Total documentation: ~31.5KB
- Coverage: Complete (from quick reference to comprehensive guide)
- Time to complete: ~20 minutes
### Total Impact
- **Total files organized/written**: 82
- **Total documentation created**: ~40KB
- **Total time**: ~35 minutes
- **Files in root**: 0 (from 71)
---
## 🎯 Key Benefits
### For the Project
✅ Clean repository root
✅ Organized documentation structure
✅ Better navigation and discoverability
✅ Improved onboarding experience
✅ Easier maintenance
### For AI Agents
✅ Faster onboarding (understand project in 5 minutes)
✅ Consistent code patterns
✅ Fewer errors (avoid common pitfalls)
✅ Better context (know what's implemented)
✅ Proper testing workflows
✅ Good commit messages
### For Human Developers
✅ Easier collaboration with AI agents
✅ Clear documentation of conventions
✅ Quick reference for common tasks
✅ Better project understanding
✅ Maintainable codebase standards
---
## 📁 Final File Structure
```
normogen/
├── docs/ # All documentation (reorganized + new)
│ ├── README.md # Main documentation index
│ ├── AI_AGENT_GUIDE.md # Comprehensive AI guide (17KB)
│ ├── AI_QUICK_REFERENCE.md # Quick reference (2.5KB)
│ ├── AI_DOCS_SUMMARY.md # This summary
│ ├── REORGANIZATION_SUMMARY.md # Reorganization details
│ ├── product/ # Product docs (5 files)
│ │ ├── README.md
│ │ ├── README.md (moved)
│ │ ├── ROADMAP.md (moved)
│ │ ├── STATUS.md (moved)
│ │ ├── introduction.md (moved)
│ │ └── encryption.md (moved)
│ ├── implementation/ # Implementation docs (36 files)
│ │ ├── README.md
│ │ ├── PHASE*.md files
│ │ ├── MEDICATION*.md files
│ │ └── FRONTEND*.md files
│ ├── testing/ # Testing docs (9 files)
│ │ ├── README.md
│ │ ├── test-*.sh scripts
│ │ └── API_TEST_RESULTS*.md
│ ├── deployment/ # Deployment docs (11 files)
│ │ ├── README.md
│ │ ├── DEPLOYMENT_GUIDE.md
│ │ ├── deploy-*.sh scripts
│ │ └── DOCKER*.md files
│ ├── development/ # Development docs (10 files)
│ │ ├── README.md
│ │ ├── COMMIT-INSTRUCTIONS.txt
│ │ ├── GIT-*.md files
│ │ └── FORGEJO-*.md files
│ └── archive/ # Empty (for future use)
├── .cursorrules # AI IDE rules (8.5KB)
├── .gooserules # Goose-specific rules (3.5KB)
├── README.md # Updated root README
├── backend/ # Rust backend
├── web/ # React frontend
├── mobile/ # Mobile (placeholder)
├── shared/ # Shared code (placeholder)
└── thoughts/ # Development notes
```
---
## 🚀 Next Steps
### Immediate (Ready to Commit)
1. ✅ All documentation files created and organized
2. ✅ Root README updated to point to new structure
3. ✅ Navigation guides created for all directories
4. ✅ AI agent documentation complete
### Recommended Actions
1. **Commit the changes**:
```bash
git add .
git commit -m "docs(ai): reorganize documentation and add AI agent guides
- Reorganize 71 docs into logical folders (product, implementation, testing, deployment, development)
- Add comprehensive AI agent documentation (17KB guide + 2.5KB quick reference)
- Add .cursorrules for AI IDE assistants
- Add .gooserules for goose agent
- Create README files for all documentation directories
- Update root README to point to organized structure"
```
2. **Test with AI agents**:
- Verify AI IDEs (Cursor, Copilot) read .cursorrules
- Test that goose follows .gooserules
- Ensure AI agents can find and use the documentation
3. **Review and refine**:
- Check if any important information is missing
- Verify all links work
- Update if patterns change
### Future Maintenance
- Keep AI_QUICK_REFERENCE.md updated with new commands
- Update AI_AGENT_GUIDE.md when architecture changes
- Maintain .cursorrules when conventions evolve
- Archive old phase documents when appropriate
---
## 📚 Quick Navigation
### For New Contributors
1. Start: [docs/README.md](./README.md)
2. Project overview: [docs/product/README.md](./product/README.md)
3. Current status: [docs/product/STATUS.md](./product/STATUS.md)
### For AI Agents
1. Quick start: [docs/AI_QUICK_REFERENCE.md](./AI_QUICK_REFERENCE.md)
2. Comprehensive: [docs/AI_AGENT_GUIDE.md](./AI_AGENT_GUIDE.md)
3. Project rules: [.cursorrules](../.cursorrules)
### For Developers
1. Development workflow: [docs/development/README.md](./development/README.md)
2. Implementation details: [docs/implementation/README.md](./implementation/README.md)
3. Testing: [docs/testing/README.md](./testing/README.md)
### For Deployment
1. Deployment guide: [docs/deployment/DEPLOYMENT_GUIDE.md](./deployment/DEPLOYMENT_GUIDE.md)
2. Quick reference: [docs/deployment/QUICK_DEPLOYMENT_REFERENCE.md](./deployment/QUICK_DEPLOYMENT_REFERENCE.md)
---
## ✅ Success Criteria - All Met
### Documentation Reorganization
- [x] All 71 documentation files moved from root
- [x] Logical folder structure created (6 directories)
- [x] README files created for each folder
- [x] Cross-references and links added
- [x] Root README updated
- [x] Zero documentation files in root
### AI Agent Documentation
- [x] Comprehensive guide created (17KB)
- [x] Quick reference created (2.5KB)
- [x] Project rules for AI IDEs (.cursorrules)
- [x] Goose-specific rules (.gooserules)
- [x] Summary documentation created
- [x] All documentation integrated into docs/ structure
---
## 🎉 Summary
In approximately **35 minutes**, we:
1. **Reorganized** 71 documentation files into a logical, navigable structure
2. **Created** 11 new documentation files (6 READMEs + 5 AI docs)
3. **Wrote** ~40KB of comprehensive documentation
4. **Established** clear patterns for future documentation
5. **Enabled** AI agents to work more effectively in the repository
6. **Improved** the project for both AI and human contributors
The repository is now:
- ✅ **Clean**: No documentation clutter in root
- ✅ **Organized**: Logical folder structure
- ✅ **Navigable**: Clear paths to find information
- ✅ **Documented**: Comprehensive guides for all audiences
- ✅ **AI-Ready**: AI agents can understand and contribute effectively
---
**Documentation Reorganization & AI Docs: Complete ✅**
**Date**: 2026-03-09
**Total Time**: ~35 minutes
**Files Organized**: 71
**Files Created**: 11
**Total Documentation**: ~40KB
---
*Ready to commit. See "Next Steps" above for commit message.*

144
docs/README.md
View file

@ -1,97 +1,59 @@
### /home/asoliver/desarrollo/normogen/./docs/README.md
```markdown
1: # Normogen Documentation Index
2:
3: Welcome to the Normogen project documentation. This directory contains all project documentation organized by category.
4:
5: ## 📁 Documentation Structure
6:
7: ### [Product](./product/)
8: Core product documentation and project overview.
9: - **[README.md](./product/README.md)** - Project overview and quick start guide
10: - **[ROADMAP.md](./product/ROADMAP.md)** - Development roadmap and milestones
11: - **[STATUS.md](./product/STATUS.md)** - Current project status
12: - **[introduction.md](./product/introduction.md)** - Project introduction and background
13: - **[encryption.md](./product/encryption.md)** - Encryption and security architecture
14:
15: ### [Implementation](./implementation/)
16: Phase-by-phase implementation plans, specs, and progress reports.
17: - **Phase 2.3** - JWT Authentication completion reports
18: - **Phase 2.4** - User management enhancements
19: - **Phase 2.5** - Access control implementation
20: - **Phase 2.6** - Security hardening
21: - **Phase 2.7** - Health data features (medications, statistics)
22: - **Phase 2.8** - Drug interactions and advanced features
23: - **Frontend** - Frontend integration plans and progress
24:
25: ### [Testing](./testing/)
26: Test scripts, test results, and testing documentation.
27: - **[API_TEST_RESULTS_SOLARIA.md](./testing/API_TEST_RESULTS_SOLARIA.md)** - API test results
28: - **test-api-endpoints.sh** - API endpoint testing script
29: - **test-medication-api.sh** - Medication API tests
30: - **test-mvp-phase-2.7.sh** - Phase 2.7 comprehensive tests
31: - **solaria-test.sh** - Solaria deployment testing
32: - **quick-test.sh** - Quick smoke tests
33:
34: ### [Deployment](./deployment/)
35: Deployment guides, Docker configuration, and deployment scripts.
36: - **[DEPLOYMENT_GUIDE.md](./deployment/DEPLOYMENT_GUIDE.md)** - Complete deployment guide
37: - **[DEPLOY_README.md](./deployment/DEPLOY_README.md)** - Deployment quick reference
38: - **[QUICK_DEPLOYMENT_REFERENCE.md](./deployment/QUICK_DEPLOYMENT_REFERENCE.md)** - Quick deployment commands
39: - **[DOCKER_DEPLOYMENT_IMPROVEMENTS.md](./deployment/DOCKER_DEPLOYMENT_IMPROVEMENTS.md)** - Docker optimization notes
40: - **deploy-and-test.sh** - Deploy and test automation
41: - **deploy-to-solaria.sh** - Solaria deployment script
42:
43: ### [Development](./development/)
44: Development workflow, Git processes, and CI/CD documentation.
45: - **[COMMIT-INSTRUCTIONS.txt](./development/COMMIT-INSTRUCTIONS.txt)** - Commit message guidelines
46: - **[FORGEJO-CI-CD-PIPELINE.md](./development/FORGEJO-CI-CD-PIPELINE.md)** - CI/CD pipeline documentation
47: - **[FORGEJO-RUNNER-UPDATE.md](./development/FORGEJO-RUNNER-UPDATE.md)** - Runner update notes
48: - **[GIT-STATUS.md](./development/GIT-STATUS.md)** - Git workflow reference
49: - **COMMIT-NOW.sh** - Quick commit automation
50:
51: ### [Archive](./archive/)
52: Historical documentation and reference materials.
53:
54: ## 🔍 Quick Links
55:
56: ### For New Contributors
57: 1. Start with [Product README](./product/README.md)
58: 2. Review the [ROADMAP](./product/ROADMAP.md)
59: 3. Check [STATUS.md](./product/STATUS.md) for current progress
60:
61: ### For Developers
62: 1. Read [DEPLOYMENT_GUIDE.md](./deployment/DEPLOYMENT_GUIDE.md)
63: 2. Review [COMMIT-INSTRUCTIONS.txt](./development/COMMIT-INSTRUCTIONS.txt)
64: 3. Check [Implementation](./implementation/) docs for feature specs
65:
66: ### For Testing
67: 1. Run [quick-test.sh](./testing/quick-test.sh) for smoke tests
68: 2. Use [test-api-endpoints.sh](./testing/test-api-endpoints.sh) for API testing
69: 3. Review [API_TEST_RESULTS_SOLARIA.md](./testing/API_TEST_RESULTS_SOLARIA.md) for test history
70:
71: ## 📊 Project Status
72:
73: - **Current Phase**: Phase 2.8 (Planning)
74: - **Backend**: ~91% complete
75: - **Frontend**: ~10% complete
76: - **Last Updated**: 2026-03-09
77:
78: ---
79:
80: *Documentation last reorganized: 2026-03-09*
```
# Normogen Documentation Index
Welcome to the Normogen project documentation. This directory contains all
project documentation organized by category.
## 📁 Documentation Structure
### [Product](./product/)
Core product documentation and project overview.
- **[README.md](./product/README.md)** - Project overview and quick start guide
- **[STATUS.md](./product/STATUS.md)** - Current project status
- **[ROADMAP.md](./product/ROADMAP.md)** - Development roadmap and milestones
- **[PROGRESS.md](./product/PROGRESS.md)** - Progress dashboard
- **[introduction.md](./product/introduction.md)** - Project introduction and background
- **[encryption.md](./product/encryption.md)** - Encryption and security architecture
### [Implementation](./implementation/)
Phase-by-phase implementation completion records (2.3 through 2.8, plus frontend).
See [implementation/README.md](./implementation/README.md) for the full list.
### [ADR](./adr/)
Architecture Decision Records — the "why" behind the major technical choices
(stack, schema, JWT, frontend, deployment).
### [Development](./development/)
Development workflow and CI/CD.
- **[CI-CD.md](./development/CI-CD.md)** - The Forgejo CI/CD pipeline (current)
- **[README.md](./development/README.md)** - Workflow and conventions
### [Testing](./testing/)
Test scripts and testing notes.
- **test-api-endpoints.sh** - API endpoint testing
- **test-medication-api.sh** - Medication API tests
- **solaria-test.sh** / **check-solaria-logs.sh** - Solaria deployment testing
- **quick-test.sh** - Quick smoke test
### [Deployment](./deployment/)
Deployment guides and scripts.
- **[DEPLOYMENT_GUIDE.md](./deployment/DEPLOYMENT_GUIDE.md)** - Complete deployment guide
- **deploy-to-solaria.sh** / **deploy-and-test-solaria.sh** - Solaria deployment scripts
### [Archive](./archive/)
Superseded and historical documentation kept for reference (phase plans, old CI
state, point-in-time test snapshots). Not current.
## 📊 Project Status
- **Backend**: Phase 2.x feature-complete (through drug interactions); security-hardened; deployed on Solaria.
- **Frontend**: Early stage (Login/Register + API/store layer; router not wired).
- **Tests**: 18 unit + 13 integration, CI-gated with MongoDB.
- See [product/STATUS.md](./product/STATUS.md) for the full breakdown.
- **Last Updated**: 2026-06-27
---
## 🤖 For AI Agents
### Quick Reference
- **[AI Agent Quick Reference](./AI_QUICK_REFERENCE.md)** - Essential commands and patterns
- **[AI Agent Guide](./AI_AGENT_GUIDE.md)** - Comprehensive guide for working in this repository
### Getting Started
1. Read [AI_QUICK_REFERENCE.md](./AI_QUICK_REFERENCE.md) for essential commands
2. Review [AI_AGENT_GUIDE.md](./AI_AGENT_GUIDE.md) for detailed workflows
3. Check [product/STATUS.md](./product/STATUS.md) for current progress
4. Follow patterns in existing code

138
docs/REORGANIZATION_SUMMARY.md
View file

@ -1,138 +0,0 @@
# Documentation Reorganization Summary
**Date**: 2026-03-09
**Task**: Reorganize project documentation into logical folders
## ✅ What Was Done
### Created Directory Structure
```
docs/
├── product/ # Product definition, features, roadmap
├── implementation/ # Phase plans, specs, progress reports
├── testing/ # Test scripts and results
├── deployment/ # Deployment guides and scripts
├── development/ # Git workflow, CI/CD, development tools
└── archive/ # Historical documentation (empty for now)
```
### Files Moved
#### Product (5 files)
- README.md
- ROADMAP.md
- STATUS.md
- introduction.md
- encryption.md
#### Implementation (36 files)
- Phase 2.3-2.8 completion reports and plans
- Medication management documentation
- Frontend integration plans
- Progress tracking files
#### Testing (9 files)
- API test scripts
- Test results (API_TEST_RESULTS_SOLARIA.md)
- Deployment test scripts
- Quick test scripts
#### Deployment (11 files)
- Deployment guides
- Docker improvements documentation
- Deployment automation scripts
#### Development (10 files)
- Git workflow documentation
- Commit guidelines
- CI/CD pipeline documentation
- Development scripts
### Files Created
#### Index Files
- **docs/README.md** - Main documentation index with navigation
- **docs/product/README.md** - Product documentation guide
- **docs/implementation/README.md** - Implementation docs with phase tracking
- **docs/testing/README.md** - Testing documentation and scripts guide
- **docs/deployment/README.md** - Deployment guides and procedures
- **docs/development/README.md** - Development workflow and tools
#### Updated Root README
- Simplified root README.md with links to organized documentation
## 📊 Statistics
- **Total files organized**: 71 files
- **Directories created**: 6 directories
- **README files created**: 6 index/guide files
- **Files moved**: 71 (100% of documentation files)
- **Files remaining in root**: 0 (all organized)
## 🎯 Benefits
### 1. **Clear Organization**
- Documentation is now categorized by purpose
- Easy to find specific types of information
- Logical flow for different user types
### 2. **Better Navigation**
- Each folder has its own README with context
- Main index provides overview of all documentation
- Cross-references between related documents
### 3. **Improved Onboarding**
- New contributors can find relevant info quickly
- Separate paths for developers, testers, and deployers
- Clear progression from product → implementation → deployment
### 4. **Maintainability**
- Easier to keep documentation organized
- Clear place to put new documentation
- Archive folder for historical documents
## 📝 How to Use
### For New Contributors
1. Start at [docs/README.md](../README.md)
2. Read [docs/product/README.md](./product/README.md) for project overview
3. Check [docs/product/STATUS.md](./product/STATUS.md) for current status
### For Developers
1. Review [docs/development/README.md](./development/README.md) for workflow
2. Check [docs/implementation/README.md](./implementation/README.md) for feature specs
3. Use [docs/testing/README.md](./testing/README.md) for testing guides
### For Deployment
1. Read [docs/deployment/DEPLOYMENT_GUIDE.md](./deployment/DEPLOYMENT_GUIDE.md)
2. Use scripts in [docs/deployment/](./deployment/)
3. Check [docs/deployment/README.md](./deployment/README.md) for reference
## 🔄 Next Steps
### Optional Improvements
- [ ] Add timestamps to old phase documents
- [ ] Consolidate duplicate Phase 2.7 documents
- [ ] Move very old documents to archive/
- [ ] Add search functionality to docs
- [ ] Create visual diagrams for architecture
### Maintenance
- Keep new documentation in appropriate folders
- Update README files when adding major documents
- Archive old documents when phases complete
## ✅ Success Criteria Met
- [x] All documentation files moved from root
- [x] Logical folder structure created
- [x] README/index files created for each folder
- [x] Cross-references and links added
- [x] Root README updated to point to new structure
- [x] Zero documentation files remaining in root directory
---
**Reorganization Complete**: 2026-03-09
**Total Time**: ~15 minutes
**Files Organized**: 71 files across 6 directories

24
docs/adr/README.md Normal file
View file

@ -0,0 +1,24 @@
# Architecture Decision Records
This directory holds the project's decision records — the "why" behind the
major technical choices. These were originally written during Phase 1 research
(dated Jan–Feb 2026) and moved here from the old `thoughts/research/` tree during
the documentation reconciliation. They are historical context, not current specs.
## Decisions
| Record | Topic |
|--------|-------|
| [tech-stack-decision.md](./tech-stack-decision.md) | Master stack choice: Rust/Axum backend, React frontend, MongoDB, JWT |
| [mongodb-schema-decision.md](./mongodb-schema-decision.md) | Document model + at-rest encryption approach |
| [jwt-authentication-decision.md](./jwt-authentication-decision.md) | JWT access/refresh tokens, recovery phrases |
| [frontend-decision-summary.md](./frontend-decision-summary.md) | React (web) + React Native (mobile, future) split |
| [state-management-decision.md](./state-management-decision.md) | Client state — *superseded*: decision was Redux Toolkit, **actual code uses Zustand** |
| [monorepo-structure.md](./monorepo-structure.md) | Repository layout (`backend/`, `web/`, `mobile/`, `docs/`) |
| [backend-deployment-constraints.md](./backend-deployment-constraints.md) | Deployment requirements (Solaria, Docker) |
| [mobile-health-frameworks-data.md](./mobile-health-frameworks-data.md) | HealthKit / Health Connect data-type reference (for future mobile work) |
| [android-health-connect-data-types.md](./android-health-connect-data-types.md) | Android Health Connect data types |
> **Note**: Where a decision diverges from the implemented code (e.g. state
> management), the code is the source of truth and the ADR is kept only as
> historical record of the reasoning at the time.

431
docs/adr/android-health-connect-data-types.md Normal file
View file

@ -0,0 +1,431 @@
# Android Health Connect - Available Data Types Research
**Date**: 2026-01-12
**Platform**: Android Health Connect API
**Source**: https://developer.android.com/health-and-fitness/guides/health-connect/plan/data-types
---
## Overview
Android Health Connect is a unified API that allows apps to read and write health and fitness data from a central on-device store. It's compatible with Android SDK 28 (Pie) and higher.
**Key Points**:
- Requires explicit user permissions for each data type
- All data is stored locally on the device
- Apps can read/write data with user consent
- Supports medical records and health data
- Privacy-focused design
---
## Complete Data Types Catalog (41 Types)
### 🏃 Physical Activity & Movement
| Data Type | Description | Use Case |
|-----------|-------------|----------|
| **StepsRecord** | Step count over time | Daily activity tracking |
| **DistanceRecord** | Distance traveled | Walking/running/cycling distances |
| **FloorsClimbedRecord** | Number of floors climbed | Stair climbing activity |
| **ElevationGainedRecord** | Elevation gained | Hiking/mountain activities |
| **SpeedRecord** | Speed measurement | Running/cycling pace |
| **StepsCadenceRecord** | Steps per minute | Running/cycling cadence |
| **CyclingPedalingCadenceRecord** | Pedal cadence | Cycling performance |
| **WheelchairPushesRecord** | Wheelchair pushes | Accessibility tracking |
| **ExerciseSessionRecord** | Complete workout sessions | Gym/fitness activities |
| **PlannedExerciseSessionRecord** | Scheduled workouts | Workout planning |
| **ActivityIntensityRecord** | Activity intensity levels | Exercise intensity zones |
---
### 💪 Body Composition & Measurements
| Data Type | Description | Use Case |
|-----------|-------------|----------|
| **WeightRecord** | Body weight | Weight tracking |
| **HeightRecord** | Height | BMI calculations |
| **BodyFatRecord** | Body fat percentage | Body composition |
| **BodyWaterMassRecord** | Body water mass | Hydration tracking |
| **BoneMassRecord** | Bone mass | Bone health |
| **LeanBodyMassRecord** | Lean muscle mass | Fitness progress |
---
### ❤️ Heart & Cardiovascular
| Data Type | Description | Use Case |
|-----------|-------------|----------|
| **HeartRateRecord** | Real-time heart rate | Heart rate monitoring |
| **RestingHeartRateRecord** | Resting heart rate | Cardiovascular health |
| **HeartRateVariabilityRmssdRecord** | HRV (RMSSD) | Stress/recovery tracking |
| **BloodPressureRecord** | Systolic/diastolic pressure | Hypertension monitoring |
| **RespiratoryRateRecord** | Breaths per minute | Respiratory health |
| **Vo2MaxRecord** | Maximum oxygen uptake | Cardiovascular fitness |
| **OxygenSaturationRecord** | Blood oxygen levels (SpO2) | Oxygen monitoring |
---
### 🌡️ Temperature & Metabolism
| Data Type | Description | Use Case |
|-----------|-------------|----------|
| **BodyTemperatureRecord** | Body temperature | Fever/health monitoring |
| **BasalBodyTemperatureRecord** | Basal body temperature | Fertility tracking |
| **SkinTemperatureRecord** | Skin temperature | Sleep/stress monitoring |
| **BasalMetabolicRateRecord** | BMR | Metabolism tracking |
---
### 🔥 Calories & Energy
| Data Type | Description | Use Case |
|-----------|-------------|----------|
| **ActiveCaloriesBurnedRecord** | Calories from activity | Exercise calorie burn |
| **TotalCaloriesBurnedRecord** | Total daily calories | Complete energy expenditure |
---
### 💧 Hydration & Nutrition
| Data Type | Description | Use Case |
|-----------|-------------|----------|
| **HydrationRecord** | Water intake | Hydration tracking |
| **NutritionRecord** | Detailed nutrition data | Diet/macronutrient tracking |
---
### 💤 Sleep & Mindfulness
| Data Type | Description | Use Case |
|-----------|-------------|----------|
| **SleepSessionRecord** | Complete sleep sessions | Sleep analysis |
| **MindfulnessSessionRecord** | Meditation/mindfulness | Mental wellness |
---
### 🩸 Women's Health
| Data Type | Description | Use Case |
|-----------|-------------|----------|
| **MenstruationPeriodRecord** | Menstrual cycle | Period tracking |
| **MenstruationFlowRecord** | Flow intensity | Cycle details |
| **IntermenstrualBleedingRecord** | Spotting between periods | Cycle health |
| **CervicalMucusRecord** | Cervical mucus | Fertility tracking |
| **OvulationTestRecord** | Ovulation test results | Fertility planning |
| **SexualActivityRecord** | Sexual activity logs | Health tracking |
---
### 🩺 Blood & Medical
| Data Type | Description | Use Case |
|-----------|-------------|----------|
| **BloodGlucoseRecord** | Blood glucose levels | Diabetes management |
---
### ⚡ Power & Performance
| Data Type | Description | Use Case |
|-----------|-------------|----------|
| **PowerRecord** | Power output | Cycling/rowing performance |
| **ForceRecord** | Force measurement | Strength training |
---
## Permissions Model
Each data type requires specific health permissions:
### Examples of Permission Strings
- `android.permission.health.READ_STEPS`
- `android.permission.health.WRITE_STEPS`
- `android.permission.health.READ_HEART_RATE`
- `android.permission.health.WRITE_HEART_RATE`
- `android.permission.health.READ_BLOOD_PRESSURE`
- `android.permission.health.WRITE_BLOOD_PRESSURE`
**Important**: Users must grant each permission individually through the Health Connect interface.
---
## Data Structure Format
Most records follow this structure:
```kotlin
Record(
startTime: Instant,
startZoneOffset: ZoneOffset,
endTime: Instant,
endZoneOffset: ZoneOffset,
metadata: Metadata {
id: String,
dataOrigin: DataOrigin,
lastModifiedTime: Instant,
clientRecordId: String?,
device: Device?,
recordingMethod: RecordingMethod?
}
)
```
Example: **BloodPressureRecord**
```kotlin
BloodPressureRecord(
systolic = Pressure.millimetersOfMercury(120.0),
diastolic = Pressure.millimetersOfMercury(80.0),
time = Instant.now(),
zoneOffset = ZoneOffset.UTC,
metadata = Metadata(...)
)
```
---
## Medical Records (New Feature)
Health Connect now supports medical records:
- **Medical resource format**: FHIR-based structure
- **Reading medical data**: Requires additional permissions
- **Writing medical data**: Vaccination records, lab results, etc.
- **Data format**: Structured medical records with standardized fields
### Medical Record Types
- Immunizations
- Lab results
- Vital signs
- Medications
- Allergies
- Conditions
- Procedures
---
## Integration Approaches for Normogen
### 1. Direct Health Connect Integration (Recommended)
**Pros**:
- Native Android integration
- No third-party dependencies
- Unified API for all data types
- Privacy-preserving (local storage)
**Cons**:
- Android-only
- Requires Android 9+ (API 28+)
- Need to handle user permissions
- Not available on older Android versions
**Implementation**:
```kotlin
// Dependency
implementation("androidx.health:health-connect-client:1.1.0-alpha07")
// Check availability
val healthConnectManager = HealthConnectManager.getOrCreate(context)
if (healthConnectManager.isAvailable) {
// Use Health Connect
}
```
### 2. Cross-Platform Wrapper Libraries
**Example**: Flutter Health Package (`health` package on pub.dev)
**Supported Data Types** (limited subset):
- Steps
- Heart rate
- Sleep
- Blood oxygen
- Blood pressure
- Weight
- Height
- Active energy burned
- Total energy burned
- Distance
- Water intake
- Nutrition
**Pros**:
- Cross-platform (iOS & Android)
- Simple API
- Active community
**Cons**:
- Limited data types
- May not support all Health Connect features
- Dependency on third-party maintenance
### 3. Hybrid Approach (Recommended for Normogen)
**Android**: Use native Health Connect API
- Access all 41 data types
- Full permission control
- Medical records support
**iOS**: Use HealthKit
- Equivalent data types
- Similar permission model
**Web/PWA**: Web Bluetooth API (limited)
- Connect to BLE devices directly
- Very limited device support
---
## Data Type Mapping to Normogen Features
| Normogen Feature | Health Connect Data Types |
|-----------------|---------------------------|
| **General Health Stats** | WeightRecord, HeightRecord, BodyFatRecord |
| **Physical Activity** | StepsRecord, DistanceRecord, ExerciseSessionRecord |
| **Heart Monitoring** | HeartRateRecord, RestingHeartRateRecord, HeartRateVariabilityRmssdRecord |
| **Blood Pressure** | BloodPressureRecord |
| **Sleep Tracking** | SleepSessionRecord |
| **Temperature** | BodyTemperatureRecord, BasalBodyTemperatureRecord, SkinTemperatureRecord |
| **Respiration** | RespiratoryRateRecord, OxygenSaturationRecord |
| **Period Tracking** | MenstruationPeriodRecord, MenstruationFlowRecord, CervicalMucusRecord, OvulationTestRecord |
| **Hydration** | HydrationRecord |
| **Nutrition** | NutritionRecord |
| **Blood Glucose** | BloodGlucoseRecord (diabetes) |
| **Lab Results** | Medical records API |
| **Medication** | Medical records API |
---
## Limitations & Considerations
### ⚠️ Missing Data Types
- **Pill identification**: No API for identifying pills by shape/appearance
- **Medication reminders**: Not built into Health Connect (app-level feature)
- **Dental information**: Not covered
- **Medical appointments**: Not covered (calendar events)
### 🔒 Privacy Requirements
- User must grant each permission explicitly
- Cannot force permissions
- Some data types require additional health permissions
- Medical records require special handling
### 📱 Device Compatibility
- **Minimum**: Android 9 (API 28)
- **Optimal**: Android 14 (API 34) for full feature set
- **Health Connect module**: Must be installed from Play Store (on Android 13) or pre-installed (Android 14+)
### 📊 Data Granularity
- **Real-time**: Available (heart rate, steps during exercise)
- **Daily summaries**: Available (most data types)
- **Historical queries**: Supported with time ranges
---
## Implementation Example
### Reading Steps Data
```kotlin
suspend fun readSteps(
healthConnectManager: HealthConnectManager,
startTime: Instant,
endTime: Instant
): List<StepsRecord> {
val response = healthConnectManager.readRecords(
ReadRecordsRequest(
recordType = StepsRecord::class,
timeRangeFilter = TimeRangeFilter.between(startTime, endTime)
)
)
return response.records
}
```
### Writing Blood Pressure Data
```kotlin
suspend fun writeBloodPressure(
healthConnectManager: HealthConnectManager,
systolic: Double,
diastolic: Double,
timestamp: Instant
) {
val record = BloodPressureRecord(
systolic = Pressure.millimetersOfMercury(systolic),
diastolic = Pressure.millimetersOfMercury(diastolic),
time = timestamp,
zoneOffset = ZoneOffset.systemDefault(),
metadata = Metadata(
dataOrigin = DataOrigin("com.normogen.app"),
lastModifiedTime = Instant.now()
)
)
healthConnectManager.insertRecords(listOf(record))
}
```
### Reading Sleep Sessions
```kotlin
suspend fun readSleepSessions(
healthConnectManager: HealthConnectManager,
startTime: Instant,
endTime: Instant
): List<SleepSessionRecord> {
val response = healthConnectManager.readRecords(
ReadRecordsRequest(
recordType = SleepSessionRecord::class,
timeRangeFilter = TimeRangeFilter.between(startTime, endTime)
)
)
return response.records
}
```
---
## Recommendations for Normogen
### ✅ Use Health Connect For:
1. **All sensor data collection** (steps, heart rate, sleep, etc.)
2. **Physical activity tracking** (exercise sessions, distance, calories)
3. **Women's health features** (period tracking, ovulation, etc.)
4. **Vital signs** (blood pressure, blood glucose, temperature)
5. **Body measurements** (weight, height, body composition)
### ❌ Don't Use Health Connect For:
1. **Medication reminders** - Use app-level scheduling
2. **Pill identification** - Not available in API
3. **Medical appointments** - Use calendar integration
4. **Lab results storage** - Store encrypted on server (as planned)
5. **Dental records** - Custom data model needed
### 🎯 Integration Strategy:
1. **Primary data source**: Health Connect for automatic sensor data
2. **Manual entry**: Allow users to manually input data not available via sensors
3. **Background sync**: Periodic sync with Health Connect to update records
4. **Privacy**: All data synced to server should be encrypted client-side (zero-knowledge)
---
## Next Steps
1. ✅ **Research complete** - All 41 data types documented
2. ⏳ **Create data mapping** - Map Normogen features to Health Connect types
3. ⏳ **Design integration** - Plan permission flow and UI
4. ⏳ **Implement PoC** - Build prototype with key data types
5. ⏳ **iOS equivalent** - Research HealthKit for comparison
---
## Resources
- [Official Documentation](https://developer.android.com/health-and-fitness/guides/health-connect/plan/data-types)
- [GitHub Samples](https://github.com/android/health-samples)
- [Health Connect on Play Store](https://play.google.com/store/apps/details?id=com.google.android.apps.healthdata)
- [Privacy Policy](https://developer.android.com/health-and-fitness/health-connect/privacy)
---
**Generated by**: goose AI assistant
**Last Updated**: 2026-01-12

786
docs/adr/backend-deployment-constraints.md Normal file
View file

@ -0,0 +1,786 @@
### /home/asoliver/desarrollo/normogen/thoughts/research/2026-02-14-backend-deployment-constraints.md
```markdown
1: # Backend Deployment Constraints
2:
3: ## Deployment Requirements
4:
5: ### Docker + Docker Compose
6: - Backend must be containerized using Docker
7: - Use Docker Compose for local development and homelab deployment
8: - Multi-stage builds for optimal image size
9: - Non-root user for security
10:
11: ### Kubernetes Compatibility
12: - Design for future Kubernetes deployment
13: - Use environment-based configuration (env vars)
14: - Health check endpoints (`/health`, `/ready`)
15: - Graceful shutdown handling
16: - Stateless application design
17: - ConfigMap and Secret ready
18:
19: ### One-Command Deployment
20: ```bash
21: # Clone repository
22: git clone https://github.com/yourusername/normogen.git
23: cd normogen
24:
25: # Setup configuration
26: cp config/example.env config/.env
27: # Edit config/.env with your settings
28:
29: # Build and run
30: docker compose build
31: docker compose up -d
32: ```
33:
34: ## Homelab Deployment (Phase 1)
35:
36: ### Port Configuration
37: - **MongoDB**: Standard ports
38: - Primary: `27017` (default MongoDB port)
39: - This allows connecting with existing MongoDB tools/admin UIs
40:
41: - **Backend API**: `6000` (homelab range)
42: - External: `6000` (host port)
43: - Internal: `8000` (container port)
44: - Mapped in docker-compose.yml
45:
46: - **Future Services**: Port range `6000-6999`
47: - `6000`: Backend API (current)
48: - `6001`: Web UI (future)
49: - `6002`: Admin dashboard (future)
50: - `6003`: Metrics/monitoring (future)
51:
52: ### Network Configuration
53: - Docker network: `normogen-network`
54: - Must communicate with existing Docker services on homelab server
55: - MongoDB accessible to host for backup/admin tools
56:
57: ### Environment Configuration
58: ```bash
59: # config/.env (gitignored)
60: # Server Configuration
61: RUST_LOG=info
62: SERVER_HOST=0.0.0.0
63: SERVER_PORT=8000
64: ALLOWED_ORIGINS=http://localhost:3000,http://localhost:6001
65:
66: # Database Configuration
67: MONGODB_URI=mongodb://mongodb:27017/normogen
68: MONGODB_DATABASE=normogen
69:
70: # JWT Configuration
71: JWT_SECRET=your-super-secret-jwt-key-here
72: JWT_ACCESS_TOKEN_EXPIRY_MINUTES=15
73: JWT_REFRESH_TOKEN_EXPIRY_DAYS=30
74:
75: # Encryption Configuration (for validation only)
76: # Actual encryption happens client-side
77: ENCRYPTION_ALGORITHM=aes-256-gcm
78:
79: # Rate Limiting
80: RATE_LIMIT_REQUESTS=100
81: RATE_LIMIT_DURATION_SECONDS=60
82: ```
83:
84: ### Docker Compose Structure
85: ```yaml
86: # docker-compose.yml
87: version: '3.8'
88:
89: services:
90: backend:
91: build:
92: context: .
93: dockerfile: docker/Dockerfile
94: container_name: normogen-backend
95: ports:
96: - "6000:8000" # Homelab port range
97: environment:
98: - RUST_LOG=${RUST_LOG:-info}
99: - SERVER_PORT=8000
100: - MONGODB_URI=mongodb://mongodb:27017/normogen
101: - MONGODB_DATABASE=${MONGODB_DATABASE:-normogen}
102: - JWT_SECRET=${JWT_SECRET}
103: - JWT_ACCESS_TOKEN_EXPIRY_MINUTES=${JWT_ACCESS_TOKEN_EXPIRY_MINUTES:-15}
104: - JWT_REFRESH_TOKEN_EXPIRY_DAYS=${JWT_REFRESH_TOKEN_EXPIRY_DAYS:-30}
105: env_file:
106: - config/.env
107: depends_on:
108: mongodb:
109: condition: service_healthy
110: networks:
111: - normogen-network
112: restart: unless-stopped
113: healthcheck:
114: test: ["CMD", "curl", "-f", "http://localhost:8000/health"]
115: interval: 30s
116: timeout: 10s
117: retries: 3
118: start_period: 40s
119:
120: mongodb:
121: image: mongo:6.0
122: container_name: normogen-mongodb
123: ports:
124: - "27017:27017" # Standard MongoDB port
125: environment:
126: - MONGO_INITDB_DATABASE=${MONGO_DATABASE:-normogen}
127: volumes:
128: - mongodb_data:/data/db
129: - mongodb_config:/data/configdb
130: networks:
131: - normogen-network
132: restart: unless-stopped
133: healthcheck:
134: test: ["CMD", "mongosh", "--eval", "db.adminCommand('ping')"]
135: interval: 10s
136: timeout: 5s
137: retries: 5
138: start_period: 10s
139:
140: volumes:
141: mongodb_data:
142: driver: local
143: mongodb_config:
144: driver: local
145:
146: networks:
147: normogen-network:
148: driver: bridge
149: ```
150:
151: ## Kubernetes Deployment (Phase 2 - Future)
152:
153: ### Manifests Structure
154: ```
155: k8s/
156: ├── base/
157: │ ├── deployment.yaml
158: │ ├── service.yaml
159: │ ├── configmap.yaml
160: │ ├── secrets.yaml
161: │ └── ingress.yaml
162: └── overlays/
163: ├── homelab/
164: │ ├── kustomization.yaml
165: │ └── patches/
166: └── production/
167: ├── kustomization.yaml
168: └── patches/
169: ```
170:
171: ### Deployment Configuration
172: - **Replicas**: 2-3 for high availability
173: - **Liveness Probe**: `/health` (10s interval, 5s timeout)
174: - **Readiness Probe**: `/ready` (5s interval, 3s timeout)
175: - **Resource Limits**:
176: - CPU: 500m-1000m
177: - Memory: 256Mi-512Mi
178: - **Helm Chart**: Optional for easier deployment
179:
180: ### Configuration Management
181: - **ConfigMap**: Non-sensitive config (log levels, ports)
182: - **Secrets**: Sensitive config (JWT secret, DB URI)
183: - **Environment Variables**: All configuration via env vars
184:
185: ## Dockerfile Design
186:
187: ### Multi-Stage Build
188: ```dockerfile
189: # docker/Dockerfile
190:
191: # Build stage
192: FROM rust:1.75-alpine AS builder
193: WORKDIR /app
194:
195: # Install build dependencies
196: RUN apk add --no-cache musl-dev pkgconf openssl-dev
197:
198: # Copy manifests
199: COPY Cargo.toml Cargo.lock ./
200:
201: # Create dummy main.rs to build dependencies
202: RUN mkdir src && echo "fn main() {}" > src/main.rs
203: RUN cargo build --release && rm -rf src
204:
205: # Copy source code
206: COPY src ./src
207:
208: # Build application
209: RUN touch src/main.rs && cargo build --release
210:
211: # Runtime stage
212: FROM alpine:3.18
213: WORKDIR /app
214:
215: # Install runtime dependencies
216: RUN apk add --no-cache ca-certificates openssl
217:
218: # Copy binary from builder
219: COPY --from=builder /app/target/release/normogen-backend /app/normogen-backend
220:
221: # Create non-root user
222: RUN addgroup -g 1000 normogen && \
223: adduser -D -u 1000 -G normogen normogen && \
224: chown -R normogen:normogen /app
225:
226: USER normogen
227:
228: # Expose port
229: EXPOSE 8000
230:
231: # Check
232: HEALTHCHECK --interval=30s --timeout=10s --start-period=40s --retries=3 \
233: CMD wget --no-verbose --tries=1 --spider http://localhost:8000/health || exit 1
234:
235: # Run application
236: CMD ["./normogen-backend"]
237: ```
238:
239: ## Configuration Management
240:
241: ### Environment Variables
242: All configuration via environment variables (12-factor app):
243: - Database connections
244: - JWT secrets
245: - API credentials
246: - Feature flags
247: - Log levels
248:
249: ### Configuration Files
250: ```
251: config/
252: ├── .env # Gitignored, local dev
253: ├── .env.example # Git committed, template
254: └── defaults.env # Git committed, defaults
255: ```
256:
257: ### Configuration Validation
258: - Validate required env vars on startup
259: - Fail fast if misconfigured
260: - Log configuration (sanitize secrets)
261:
262: ## Endpoints
263:
264: ### Check Endpoints
265: ```rust
266: // GET /health - Liveness probe
267: // Returns: {"status": "ok"}
268: // Used by: K8s liveness probe, Docker check
269: // Purpose: Is the app running?
270:
271: // GET /ready - Readiness probe
272: // Returns: {"status": "ready", "database": "connected"}
273: // Used by: K8s readiness probe
274: // Purpose: Is the app ready to serve traffic?
275: ```
276:
277: ## Logging & Observability
278:
279: ### Structured Logging
280: - JSON format for production
281: - Log levels: ERROR, WARN, INFO, DEBUG, TRACE
282: - Request ID tracing
283: - Sensitive data sanitization
284:
285: ### Metrics (Future)
286: - Prometheus endpoint: `/metrics`
287: - Request rate, error rate, latency
288: - Database connection pool status
289:
290: ## Security Considerations
291:
292: ### Container Security
293: - Non-root user (UID 1000)
294: - Read-only filesystem (except /tmp)
295: - Minimal base image (Alpine)
296: - No shell in runtime image
297: - Security scanning (Trivy, Snyk)
298:
299: ### Secrets Management
300: - Never commit secrets to git
301: - Use environment variables
302: - K8s: Use secrets, not configmaps
303: - Docker: Use env_file or Docker secrets
304: - Gitignore: `config/.env`
305:
306: ## Deployment Checklist
307:
308: ### Initial Setup
309: - [ ] Clone repository
310: - [ ] Copy `config/.env.example` to `config/.env`
311: - [ ] Configure environment variables
312: - [ ] Create Docker network: `docker network create normogen-network`
313: - [ ] Generate JWT secret: `openssl rand -base64 32`
314:
315: ### Build & Run
316: - [ ] Build: `docker compose build`
317: - [ ] Run: `docker compose up -d`
318: - [ ] Check logs: `docker compose logs -f backend`
319: - [ ] Check status: `curl http://localhost:6000/health`
320: - [ ] Check ready: `curl http://localhost:6000/ready`
321:
322: ### Verification
323: - [ ] Backend responds on port 6000
324: - [ ] MongoDB accessible on port 27017
325: - [ ] Checks passing
326: - [ ] Database connection working
327: - [ ] JWT authentication working
328:
329: ## Questions for Clarification
330:
331: ### Environment
332: 1. **Reverse Proxy**: Will you use a reverse proxy (Nginx, Traefik, Caddy)?
333: - If yes, should TLS be handled at proxy or backend?
334: - What domain/path for the API?
335:
336: 2. **MongoDB Deployment**:
337: - Is MongoDB already running in your homelab?
338: - Or should docker-compose spin up a dedicated MongoDB instance for Normogen?
339: - If existing: What's the connection string?
340:
341: 3. **Resource Limits**:
342: - Any CPU/memory constraints for the homelab?
343: - Suggested limits: 500m CPU, 512Mi RAM?
344:
345: 4. **Backup Strategy**:
346: - MongoDB backups? (Volume mount, scheduled dump)
347: - Configuration backups?
348:
349: 5. **Monitoring**:
350: - Log aggregation? (ELK, Loki, Splunk)
351: - Metrics collection? (Prometheus, Grafana)
352: - APM? (Datadog, New Relic)
353:
354: 6. **CI/CD**:
355: - Will you use GitHub Actions, GitLab CI, or Jenkins?
356: - Auto-deploy on commit to main branch?
357: - Automated testing before deploy?
358:
359: ### Development Workflow
360: 7. **Hot Reload**: Development mode with hot reload?
361: - Use `cargo-watch` for auto-rebuild on file changes?
362:
363: 8. **Database Migrations**:
364: - Run migrations on startup?
365: - Separate migration tool?
366:
367: 9. **Seed Data**:
368: - Seed development database with sample data?
369:
370: ### Production Readiness
371: 10. **Rate Limiting**:
372: - Per-IP rate limiting?
373: - Per-user rate limiting (after auth)?
374:
375: 11. **CORS Configuration**:
376: - Allowed origins for local dev?
377: - Allowed origins for production?
378:
379: 12. **TLS/HTTPS**:
380: - Local dev: HTTP or HTTPS?
381: - Production: TLS termination at proxy?
382:
383: ## Next Steps
384:
385: Once the above questions are answered, we can proceed with:
386:
387: 1. **Phase 2.1**: Docker Compose Setup
388: - Create Dockerfile (multi-stage build)
389: - Create docker-compose.yml
390: - Create configuration templates
391: - Test local deployment
392:
393: 2. **Phase 2.2**: Axum Server Setup
394: - Initialize Rust project
395: - Setup Axum dependencies
396: - Create check endpoints
397: - Test containerized build
398:
399: 3. **Phase 2.3**: MongoDB Integration
400: - MongoDB connection pooling
401: - Readiness check with database
402: - Test database connectivity
403:
404: 4. **Phase 2.4**: Configuration Management
405: - Environment variable validation
406: - Configuration struct
407: - Secret loading
408:
409: 5. **Phase 2.5**: Deployment Testing
410: - Test on homelab server
411: - Verify checks
412: - Verify database connection
413: - Test restart behavior
```
## Deployment Decisions (User Confirmed)
### 1. MongoDB Deployment
✅ **New MongoDB instance in docker-compose**
- MongoDB will be spun up as part of docker-compose.yml
- Volume mounts for data persistence
- Standard port 27017 for admin tool access
### 2. Reverse Proxy
✅ **Using reverse proxy for TLS termination**
- Backend handles HTTP only
- TLS/HTTPS handled by reverse proxy (Nginx/Traefik/Caddy)
- CORS configuration needed for allowed origins
### 3. Development Workflow
✅ **Hot reload for local development**
- Use `cargo-watch` for auto-rebuild on file changes
- Separate docker-compose.dev.yml for development
- Production build without hot reload
### 4. Resource Limits
✅ **Homelab resource constraints**
- CPU: 1000m (1 CPU core limit)
- Memory: 1000Mi (1GB RAM limit)
- Configure in docker-compose.yml
- Configure in Kubernetes Deployment for future
### 5. Repository & CI/CD
✅ **Forgejo repository**
- Git hosting: Forgejo (self-hosted GitHub-compatible)
- CI/CD: Forgejo Actions (GitHub Actions compatible)
- Single repository for backend, mobile, web
## Updated Monorepo Structure
```
normogen/ # Root repository
├── backend/ # Rust backend
│ ├── src/ # Source code
│ │ ├── main.rs
│ │ ├── auth/
│ │ ├── api/
│ │ ├── db/
│ │ └── config/
│ ├── docker/
│ │ └── Dockerfile # Multi-stage build
│ ├── Cargo.toml
│ ├── Cargo.lock
│ ├── docker-compose.yml # Homelab deployment
│ ├── docker-compose.dev.yml # Development with hot reload
│ ├── config/
│ │ ├── .env.example
│ │ └── defaults.env
│ └── k8s/ # Future Kubernetes manifests
│ ├── base/
│ └── overlays/
│
├── mobile/ # React Native (iOS + Android)
│ ├── src/ # Source code
│ │ ├── components/
│ │ ├── screens/
│ │ ├── navigation/
│ │ ├── store/
│ │ ├── services/
│ │ └── utils/
│ ├── package.json
│ ├── tsconfig.json
│ ├── App.tsx
│ └── android/
│ └── ios/
│
├── web/ # React web app
│ ├── src/ # Source code
│ │ ├── components/
│ │ ├── pages/
│ │ ├── store/
│ │ ├── services/
│ │ └── utils/
│ ├── package.json
│ ├── tsconfig.json
│ └── index.html
│
├── shared/ # Shared TypeScript code
│ ├── src/
│ │ ├── types/ # Shared types
│ │ ├── validation/ # Zod schemas
│ │ ├── encryption/ # Encryption utilities
│ │ └── api/ # API client
│ └── package.json
│
├── thoughts/ # Research & design docs
│ └── research/
│
├── .gitignore # Root gitignore
├── README.md # Root README
└── docker-compose.root.yml # Optional: Run all services
```
### Updated Docker Compose with Resource Limits
```yaml
# docker-compose.yml (production)
version: '3.8'
services:
backend:
build:
context: .
dockerfile: docker/Dockerfile
container_name: normogen-backend
ports:
- "6000:8000"
environment:
- RUST_LOG=${RUST_LOG:-info}
- SERVER_PORT=8000
- MONGODB_URI=mongodb://mongodb:27017/normogen
- MONGODB_DATABASE=${MONGODB_DATABASE:-normogen}
- JWT_SECRET=${JWT_SECRET}
- JWT_ACCESS_TOKEN_EXPIRY_MINUTES=${JWT_ACCESS_TOKEN_EXPIRY_MINUTES:-15}
- JWT_REFRESH_TOKEN_EXPIRY_DAYS=${JWT_REFRESH_TOKEN_EXPIRY_DAYS:-30}
env_file:
- config/.env
depends_on:
mongodb:
condition: service_healthy
networks:
- normogen-network
restart: unless-stopped
deploy:
resources:
limits:
cpus: '1.0' # 1 CPU core
memory: 1000M # 1GB RAM
reservations:
cpus: '0.25'
memory: 256M
check:
test: ["CMD", "wget", "--no-verbose", "--tries=1", "--spider", "http://localhost:8000/health"]
interval: 30s
timeout: 10s
retries: 3
start_period: 40s
mongodb:
image: mongo:6.0
container_name: normogen-mongodb
ports:
- "27017:27017"
environment:
- MONGO_INITDB_DATABASE=${MONGO_DATABASE:-normogen}
volumes:
- mongodb_data:/data/db
- mongodb_config:/data/configdb
networks:
- normogen-network
restart: unless-stopped
deploy:
resources:
limits:
cpus: '0.5'
memory: 512M
reservations:
cpus: '0.25'
memory: 128M
check:
test: ["CMD", "mongosh", "--eval", "db.adminCommand('ping')"]
interval: 10s
timeout: 5s
retries: 5
start_period: 10s
volumes:
mongodb_data:
driver: local
mongodb_config:
driver: local
networks:
normogen-network:
driver: bridge
```
### Development Docker Compose (Hot Reload)
```yaml
# docker-compose.dev.yml (development)
version: '3.8'
services:
backend:
build:
context: .
dockerfile: docker/Dockerfile.dev
container_name: normogen-backend-dev
ports:
- "6000:8000"
volumes:
- ./src:/app/src # Hot reload: Mount source code
- ./Cargo.toml:/app/Cargo.toml
environment:
- RUST_LOG=debug
- SERVER_PORT=8000
- MONGODB_URI=mongodb://mongodb:27017/normogen
- MONGODB_DATABASE=normogen_dev
- JWT_SECRET=dev-secret-do-not-use-in-production
- CARGO_WATCH=1 # Enable hot reload
depends_on:
mongodb:
condition: service_healthy
networks:
- normogen-network
restart: unless-stopped
mongodb:
image: mongo:6.0
container_name: normogen-mongodb-dev
ports:
- "27017:27017"
environment:
- MONGO_INITDB_DATABASE=normogen_dev
volumes:
- mongodb_dev_data:/data/db
networks:
- normogen-network
check:
test: ["CMD", "mongosh", "--eval", "db.adminCommand('ping')"]
interval: 10s
timeout: 5s
retries: 5
volumes:
mongodb_dev_data:
driver: local
networks:
normogen-network:
driver: bridge
```
### Development Dockerfile (with cargo-watch)
```dockerfile
# docker/Dockerfile.dev
FROM rust:1.75-alpine
WORKDIR /app
# Install runtime and build dependencies
RUN apk add --no-cache \
musl-dev \
pkgconf \
openssl-dev \
curl \
wget \
git
# Install cargo-watch for hot reload
RUN cargo install cargo-watch
# Copy manifests
COPY Cargo.toml Cargo.lock ./
# Create dummy main.rs to build dependencies
RUN mkdir src && echo "fn main() {}" > src/main.rs
RUN cargo build && rm -rf src
# Copy source code (will be mounted as volume in dev)
COPY src ./src
# Expose port
EXPOSE 8000
# Run with hot reload
CMD ["cargo-watch", "-x", "run"]
```
### Forgejo CI/CD (Example)
```yaml
# .forgejo/workflows/backend-build.yml
name: Build and Test Backend
on:
push:
branches: [main, develop]
pull_request:
branches: [main, develop]
jobs:
build:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Install Rust
uses: actions-rust-lang/setup-rust-toolchain@v1
- name: Cache cargo registry
uses: actions/cache@v3
with:
path: ~/.cargo/registry
key: ${{ runner.os }}-cargo-registry-${{ hashFiles('**/Cargo.lock') }}
- name: Build backend
working-directory: ./backend
run: cargo build --verbose
- name: Run tests
working-directory: ./backend
run: cargo test --verbose
- name: Build Docker image
working-directory: ./backend
run: docker build -f docker/Dockerfile -t normogen-backend:${{ github.sha }} .
deploy-homelab:
needs: build
runs-on: ubuntu-latest
if: github.ref == 'refs/heads/main'
steps:
- name: Deploy to homelab
run: |
echo "Deploy to homelab server"
# Add deployment script here
```
### CORS Configuration (for Reverse Proxy)
```rust
// src/config/cors.rs
use tower_http::cors::{CorsLayer, Any};
use axum::http::{HeaderValue, Method};
pub fn create_cors_layer(allowed_origins: &str) -> CorsLayer {
let origins: Vec<&str> = allowed_origins.split(',').map(|s| s.trim()).collect();
CorsLayer::new()
.allow_origin(origins.into_iter().map(|s| {
s.parse::<HeaderValue>().unwrap()
}).collect::<Vec<_>>())
.allow_methods([Method::GET, Method::POST, Method::PUT, Method::PATCH, Method::DELETE, Method::OPTIONS])
.allow_headers(Any)
.allow_credentials(true)
.max_age(3600)
}
```
## Updated Deployment Checklist
### Initial Setup
- [ ] Clone repository from Forgejo
- [ ] Copy `backend/config/.env.example` to `backend/config/.env`
- [ ] Configure environment variables
- [ ] Generate JWT secret: `openssl rand -base64 32`
- [ ] Set resource limits in docker-compose.yml
### Development Setup
- [ ] Run development: `docker compose -f docker-compose.dev.yml up -d`
- [ ] Check logs: `docker compose -f docker-compose.dev.yml logs -f backend`
- [ ] Test hot reload: Make changes to src/, verify auto-rebuild
### Production Deployment
- [ ] Run production: `docker compose up -d`
- [ ] Check logs: `docker compose logs -f backend`
- [ ] Verify resource limits: `docker stats`
- [ ] Configure reverse proxy (Nginx/Traefik/Caddy)
- [ ] Configure reverse proxy CORS headers
- [ ] Test API through reverse proxy

147
docs/adr/frontend-decision-summary.md Normal file
View file

@ -0,0 +1,147 @@
# Frontend Framework Decision Summary
**Date**: 2026-02-14
**Decision**: **React Native + React**
---
## Platform Strategy
### Primary: Mobile Apps (iOS + Android)
- Daily health tracking and data entry
- Health sensor integration (HealthKit, Health Connect)
- QR code scanning (lab results)
- Push notifications (reminders)
- Background sync
### Secondary: Web Browser
- Complex data visualization and charts
- Historical trend analysis
- Profile and family management
- Extensive reporting
---
## Framework Decision: React Native + React
| Criteria | React Native + React | Flutter | Native |
|----------|---------------------|----------|--------|
| Code Sharing | 70-80% | 0% | 0% |
| Development Cost | Low | Medium | High |
| Time to Market | Fast | Medium | Slow |
| Health Sensors | ✅ Excellent | ✅ Excellent | ✅ Excellent |
| QR Scanning | ✅ Excellent | ✅ Excellent | ✅ Excellent |
| Performance | Good | Excellent | Excellent |
| Team Skills | JS/TS only | Dart + JS | Swift + Kotlin + JS |
| Ecosystem | Largest | Large | Native |
---
## Key Advantages
### 1. Code Sharing (70-80%)
- Business logic: State, API, encryption
- Data validation: Zod schemas
- Date handling: date-fns
- Utilities: Monorepo shared package
### 2. Health Sensors
- iOS: react-native-health (HealthKit)
- Android: react-native-google-fit (Health Connect)
- Background sensor data collection
### 3. Encryption
- react-native-quick-crypto
- AES-256-GCM, PBKDF2
- Secure key storage (Keychain/Keystore)
- Web Crypto API compatible
### 4. QR Scanning
- react-native-camera
- Fast, accurate scanning
### 5. Web Charts
- Recharts (React)
- Beautiful, interactive visualizations
- Perfect for health data
### 6. Team & Cost
- Single language: JavaScript/TypeScript
- Single ecosystem: npm
- Lower development cost
- Faster time to market
---
## Technology Stack
### Mobile (React Native)
- Framework: React Native 0.73+
- Language: TypeScript
- Health: react-native-health, react-native-google-fit
- Camera: react-native-camera
- Encryption: react-native-quick-crypto
- HTTP: Axios
### Web (React)
- Framework: React 18+
- Language: TypeScript
- Charts: Recharts
- HTTP: Axios
- UI: Tailwind CSS / Chakra UI
### Shared (Monorepo)
- Language: TypeScript
- State: Redux/Zustand (TBD)
- API: Axios
- Encryption: AES-256-GCM, PBKDF2
- Validation: Zod
- Date: date-fns
---
## Implementation Timeline
### Phase 1: Mobile MVP (8-12 weeks)
- Setup React Native project
- Integrate HealthKit and Health Connect
- Implement encryption
- Build core UI
- Test QR scanning
- Background sync
### Phase 2: Web Companion (4-6 weeks)
- Setup React project
- Share business logic
- Build charts
- Profile management UI
### Phase 3: Polish & Launch (4-6 weeks)
- Performance optimization
- Security audit
- App store submission
- Beta launch
---
## Next Steps
1. ✅ Mobile Framework: React Native
2. ⏭️ State Management: Redux vs Zustand
3. ⏭️ Database Schema Design
4. ⏭️ Create Health Sensor POC
5. ⏭️ Implement Authentication
---
## Conclusion
**React Native + React** is optimal for Normogen:
- 70-80% code sharing reduces development cost
- Excellent health sensor integration
- Single language (JavaScript/TypeScript)
- Great chart visualization for web
- Faster time to market
**Decision**: Use **React Native** for mobile (iOS + Android) and **React** for web companion app.

174
docs/adr/jwt-authentication-decision.md Normal file
View file

@ -0,0 +1,174 @@
# JWT Authentication Decision Summary
**Date**: 2026-02-14
**Decision**: **JWT with Refresh Tokens + Recovery Phrases**
---
## Authentication Strategy
### Primary: JWT (JSON Web Tokens)
**Why JWT?**
- Stateless design scales to 1000+ concurrent connections
- Works perfectly with mobile apps (AsyncStorage)
- No server-side session storage needed
- Easy to scale Axum horizontally
### Token Types
**Access Token** (15 minutes)
- Used for API requests
- Short-lived for security
- Contains: user_id, email, family_id, permissions
**Refresh Token** (30 days)
- Used to get new access tokens
- Long-lived for convenience
- Stored in MongoDB for revocation
- Rotated on every refresh
---
## Token Revocation Strategies
### 1. Refresh Token Blacklist (Recommended) ⭐
- Store refresh tokens in MongoDB
- Mark as revoked on logout
- Check on every refresh
### 2. Token Versioning
- Include version in JWT claims
- Increment on password change
- Invalidate all tokens when version changes
### 3. Access Token Blacklist (Optional)
- Store revoked access tokens in Redis
- For immediate revocation
- Auto-expires with TTL
---
## Refresh Token Pattern
### Token Rotation (Security Best Practice) ⭐
**Flow**:
1. Client sends refresh_token
2. Server verifies refresh_token (not revoked, not expired)
3. Server generates new access_token
4. Server generates new refresh_token
5. Server revokes old refresh_token
6. Server returns new tokens
**Why?** Prevents reuse of stolen refresh tokens
---
## Zero-Knowledge Password Recovery
### Recovery Phrases (from encryption.md)
**Registration**:
1. Client generates recovery phrase (random 32 bytes)
2. Client encrypts recovery phrase with password
3. Client sends: email, password hash, encrypted recovery phrase
4. Server stores: email, password hash, encrypted recovery phrase
**Password Recovery**:
1. User requests recovery (enters email)
2. Server returns: encrypted recovery phrase
3. Client decrypts with recovery key (user enters manually)
4. User enters new password
5. Client re-encrypts recovery phrase with new password
6. Client sends: new password hash, re-encrypted recovery phrase
7. Server updates: password hash, encrypted recovery phrase, token_version + 1
8. All existing tokens invalidated (version mismatch)
---
## Family Member Access Control
### Permissions in JWT
```typescript
// JWT permissions based on family role
{
"parent": [
"read:own_data",
"write:own_data",
"read:family_data",
"write:family_data",
"manage:family_members",
"delete:data"
],
"child": [
"read:own_data",
"write:own_data"
],
"elderly": [
"read:own_data",
"write:own_data",
"read:family_data"
]
}
```
### Permission Middleware
- Check permissions on protected routes
- Return 403 Forbidden if insufficient permissions
- Works with JWT claims
---
## Technology Stack
### Backend (Axum)
- jsonwebtoken 9.x (JWT crate)
- bcrypt 0.15 (password hashing)
- mongodb 3.0 (refresh token storage)
- redis (optional, for access token blacklist)
### Client (React Native + React)
- AsyncStorage (token storage)
- axios (API client with JWT interceptor)
- PBKDF2 (password derivation)
- AES-256-GCM (data encryption)
---
## Implementation Timeline
- **Week 1**: Basic JWT (login, register, middleware)
- **Week 1-2**: Refresh tokens (storage, rotation)
- **Week 2**: Token revocation (blacklist, versioning)
- **Week 2-3**: Password recovery (recovery phrases)
- **Week 3**: Family access control (permissions)
- **Week 3-4**: Security hardening (rate limiting, HTTPS)
**Total**: 3-4 weeks
---
## Next Steps
1. Implement basic JWT service in Axum
2. Create MongoDB schema for users and refresh tokens
3. Implement login/register/refresh/logout handlers
4. Create JWT middleware for protected routes
5. Implement token revocation (blacklist + versioning)
6. Integrate password recovery (from encryption.md)
7. Implement family access control (permissions)
8. Test entire authentication flow
9. Create client-side authentication (React Native + React)
---
## References
- [Comprehensive JWT Research](./2026-02-14-jwt-authentication-research.md)
- [Normogen Encryption Guide](../encryption.md)
- [JWT RFC 7519](https://tools.ietf.org/html/rfc7519)
- [Axum JWT Guide](https://docs.rs/axum/latest/axum/)
- [OWASP JWT Cheat Sheet](https://cheatsheetseries.owasp.org/cheatsheets/JSON_Web_Token_for_Java_Cheat_Sheet.html)

635
docs/adr/mobile-health-frameworks-data.md Normal file
View file

@ -0,0 +1,635 @@
---
date: 2026-01-05T20:27:17-03:00
git_commit: N/A (not a git repository)
branch: N/A
repository: normogen
topic: "Mobile Health Frameworks - Available Data Types"
tags: [research, healthkit, health-connect, mobile-integration, data-types]
status: complete
---
# Research: Mobile Health Frameworks Data Availability
## Research Question
What health data can be accessed from mobile phone health frameworks (Apple HealthKit and Google Health Connect) with proper application permissions?
## Summary
**Key Finding:** Both iOS and Android provide comprehensive access to health data through their respective frameworks (HealthKit and Health Connect). With proper permissions, applications can access **50+ different health data types** including body measurements, vitals, activity, sleep, nutrition, and reproductive health.
**Platform Coverage:**
- **Apple HealthKit (iOS):** 9 major categories, 50+ data types
- **Google Health Connect (Android):** 8 major categories, 45+ data types
- **Common to Both:** ~15 core data types with overlap
**User Control:** Both platforms require explicit user permission for each data category, with granular controls and easy revocation.
---
## Apple HealthKit (iOS)
### Data Categories Available
#### 1. Body Measurements
With basic permissions:
- **Weight** - kg, lbs
- **Height** - cm, in, ft
- **Body Mass Index (BMI)** - calculated
- **Body Fat Percentage** - %age
- **Lean Body Mass** - kg, lbs
#### 2. Vitals (Requires Special Permissions)
- **Heart Rate** - beats per minute (BPM)
- **Resting Heart Rate** - BPM
- **Blood Pressure** - systolic/diastolic (mmHg)
- **Body Temperature** - °C, °F
- **Respiratory Rate** - breaths per minute
- **Oxygen Saturation (SpO2)** - percentage
- **Blood Glucose** - mg/dL, mmol/L
#### 3. Fitness & Activity
- **Step Count** - daily/total steps
- **Distance Walking/Running** - km, mi
- **Flights Climbed** - count
- **Active Energy Burned** - kcal
- **Basal Energy Burned** - kcal/day
- **Exercise Duration** - minutes/hours
- **Workouts** - type, duration, calories, route
#### 4. Sleep Analysis
- **Sleep Duration** - total time asleep
- **Time in Bed** - total time in bed
- **Sleep Stages** - in bed, asleep, awake
- **Sleep Quality** - REM, light, deep sleep
#### 5. Mobility
- **Walking Speed** - m/s
- **Walking Asymmetry** - percentage
- **Walking Steadiness** - score
- **Step Length** - cm, in
#### 6. Nutrition
- **Dietary Energy** - calories
- **Macronutrients** - carbs, protein, fat (total, saturated, unsaturated)
- **Fiber** - grams
- **Sugar** - grams
- **Sodium** - milligrams
- **Water Intake** - liters, cups, ounces
- **Vitamins & Minerals** - various (A, C, D, iron, calcium, etc.)
#### 7. Reproductive Health
- **Menstrual Flow** - light, medium, heavy
- **Basal Body Temperature** - °C, °F
- **Cervical Mucus Quality** - type and amount
- **Ovulation Test Result** - positive/negative
- **Sexual Activity** - protected/unprotected
- **Spotting** - yes/no
#### 8. Medical Records & Labs (Clinical Data)
- **Allergy Records** - allergen, severity, reaction
- **Condition Records** - diagnosis, status
- **Immunization Records** - vaccine, date
- **Lab Result Records** - test name, result, unit, reference range
- **Medication Records** - name, dosage, frequency
- **Procedure Records** - procedure, date, outcome
- **Vital Signs Records** - clinical measurements
#### 9. Apple Watch Specific Data
- **ECG Results** - ECG readings and classifications
- **AFib Detection** - atrial fibrillation notifications
- **Fall Detection** - fall events
- **Noise Levels** - environmental sound exposure
- **Headphone Audio Levels** - audio exposure
### Permission Requirements
**Info.plist Required Entries:**
```xml
<key>NSHealthShareUsageDescription</key>
<string>We need access to your health data to track and analyze your wellness metrics.</string>
<key>NSHealthUpdateUsageDescription</key>
<string>We need permission to save health data to your Health app.</string>
```
**Entitlements Required:**
- HealthKit capability in Xcode project settings
- Special entitlements for clinical data access
**User Permissions:**
- User must explicitly grant permission for each data category
- Prompts shown at first access to each category
- User can revoke permissions in Settings > Health > Data Access & Devices
- Clinical data requires additional user consent
**Metadata Available:**
- **Timestamp:** Start and end time (millisecond precision)
- **Device:** Source device (iPhone, Apple Watch, third-party app)
- **Units:** Always included with proper conversions
- **Provenance:** Which app/device provided the data
- **Accuracy:** For sensor-based measurements
- **User Notes:** Optional user-created annotations
---
## Google Health Connect (Android)
### Data Types Available
#### 1. Activity & Exercise
- **Steps** - count
- **Distance** - meters, kilometers, miles
- **Floors** - count
- **Elevation** - meters, feet
- **Exercise Sessions** - type (running, walking, cycling, etc.), duration, calories
- **Swimming** - strokes, laps, distance
- **Wheelchair Pushes** - count
- **Golf Swings** - count (for supported apps)
#### 2. Body Measurements
- **Weight** - kg, lbs
- **Height** - meters, centimeters, feet, inches
- **Body Fat** - percentage
- **Basal Metabolic Rate** - kcal/day
- **Body Water Mass** - kg
- **Bone Mass** - kg
- **Lean Body Mass** - kg
#### 3. Vitals
- **Heart Rate** - BPM
- **Resting Heart Rate** - BPM
- **Heart Rate Variability** - milliseconds
- **Blood Pressure** - systolic/diastolic in mmHg
- **Oxygen Saturation (SpO2)** - percentage
- **Body Temperature** - °C, °F
- **Respiratory Rate** - breaths/minute
#### 4. Sleep
- **Sleep Sessions** - start time, end time, total duration
- **Sleep Stages** - awake, REM, light, deep sleep with durations
- **Sleep Latency** - time to fall asleep
#### 5. Nutrition
- **Hydration** - volume in mL, oz, cups
- **Nutrition** - calories, macronutrients, micronutrients
- **Meal Information** - meal type (breakfast, lunch, dinner, snack)
#### 6. Cycle Tracking
- **Menstruation Flow** - flow amount and type
- **Menstruation Period** - start and end dates
- **Ovulation** - positive, negative, test result
- **Cervical Mucus** - type and quantity
- **Sexual Activity** - protection status
- **Spotting** - yes/no
#### 7. Clinical Data
- **Blood Glucose** - mg/dL, mmol/L
- **Lab Test Results** - similar to Apple HealthKit
#### 8. Physical Activity Details
- **Exercise Type** - running, walking, cycling, swimming, etc.
- **Exercise Duration** - time in minutes/hours
- **Exercise Calories** - kcal burned
- **Exercise Route** - GPS data path (if available)
### Permission Requirements
**AndroidManifest.xml:**
```xml
<uses-permission android:name="android.permission.health.READ_HEALTH_DATA" />
<uses-permission android:name="android.permission.health.WRITE_HEALTH_DATA" />
```
**Runtime Permissions:**
- Granular permission requests per data type
- User approves each category individually
- Health Connect app must be installed on device
- User can manage permissions in Health Connect app
**Requirements:**
- Android API level 34+ (Android 14) recommended
- Health Connect Jetpack library
- Google Play Services (on Play Store devices)
- User consent for each data type read
**Metadata Available:**
- **Timestamps:** Start and end time (millisecond precision)
- **Device/Source:** Which app or device provided data
- **Accuracy:** Measurement precision
- **Units:** Always included
- **Entry Method:** Manual vs automatic/sensor
---
## Cross-Platform Comparison
### Common Data Types (Both Platforms)
These data types are available on both iOS and Android with consistent structure:
| Data Type | Apple HealthKit | Google Health Connect | Notes |
|-----------|----------------|----------------------|-------|
| **Weight** | ✓ | ✓ | Both support kg/lbs |
| **Height** | ✓ | ✓ | Both support metric/imperial |
| **Steps** | ✓ | ✓ | Daily count and historical |
| **Distance** | ✓ | ✓ | Walking/running distance |
| **Heart Rate** | ✓ | ✓ | BPM, resting HR, HRV |
| **Blood Pressure** | ✓ | ✓ | Systolic/diastolic |
| **Sleep** | ✓ | ✓ | Duration, stages |
| **Active Energy** | ✓ | ✓ | Calories burned |
| **Body Temperature** | ✓ | ✓ | °C/°F |
| **Blood Glucose** | ✓ | ✓ | mg/dL, mmol/L |
| **Respiratory Rate** | ✓ | ✓ | Breaths per minute |
| **SpO2** | ✓ | ✓ | Oxygen saturation |
| **Nutrition** | ✓ | ✓ | Calories, macros, hydration |
| **Exercise** | ✓ | ✓ | Type, duration, calories |
| **Body Fat %** | ✓ | ✓ | Percentage |
### Platform-Specific Features
**Apple-Only:**
- ECG measurements (Apple Watch)
- Atrial fibrillation detection
- Walking steadiness/asymmetry metrics
- Environmental sound levels
- More detailed mobility analysis
- Integration with Apple ecosystem (Watch, iPad, Mac)
**Android-Only:**
- More granular exercise types
- Broader device ecosystem (Samsung, Fitbit, Garmin, etc.)
- More flexible third-party app integrations
- Earlier API access for some features
### Unit Conversions
Both platforms handle units automatically:
| Measurement | iOS Units | Android Units | Notes |
|------------|-----------|---------------|-------|
| Weight | kg, lbs | kg, lbs | 1 kg = 2.20462 lbs |
| Height | cm, in | cm, in, ft+in | 1 in = 2.54 cm |
| Temperature | °C, °F | °C, °F | °F = (°C × 9/5) + 32 |
| Glucose | mg/dL, mmol/L | mg/dL, mmol/L | mg/dL = mmol/L × 18.02 |
| Distance | km, mi | km, mi | 1 mi = 1.60934 km |
### Time Precision
- **Apple:** Millisecond precision (Unix timestamp)
- **Android:** Millisecond precision (Unix timestamp)
- **Both:** Support historical queries with date ranges
- **Best Practice:** Store all timestamps in UTC on server
---
## Integration Complexity Assessment
### Apple HealthKit
**Complexity:** ⭐⭐⭐ (Medium - 3/5)
**Advantages:**
- Mature, stable framework (since iOS 8)
- Excellent documentation (with Apple Developer account)
- Strong type safety with Swift
- Consistent API across iOS versions
- Good debugging tools in Xcode
- Deep integration with Apple Watch
**Challenges:**
- Requires Mac for development
- Requires Xcode
- Simulator has limited HealthKit support
- Testing on physical device required
- Some features require Apple Developer Program ($99/year)
**Development Requirements:**
- macOS with Xcode
- iOS deployment target: iOS 13+ (for full features)
- Swift or Objective-C
- HealthKit framework entitlement
### Google Health Connect
**Complexity:** ⭐⭐⭐⭐ (Medium-High - 4/5)
**Advantages:**
- Modern, actively developed framework
- Centralizes data from all health apps
- Cross-app data sharing
- User privacy controls
- Works on wide range of devices
**Challenges:**
- Newer framework (introduced 2023, replacing Google Fit)
- Documentation still evolving
- Android version compatibility (API 34+ recommended)
- Device fragmentation (different OEM implementations)
- Health Connect app must be installed separately
- More complex testing matrix (device/OS combinations)
**Development Requirements:**
- Android Studio
- Minimum SDK: API 26 (Android 8) with compatibility layer
- Recommended SDK: API 34 (Android 14) for full features
- Kotlin or Java
- Health Connect Jetpack library
- Google Play Services (optional but recommended)
---
## Recommended MVP Integration Strategy
### Phase 1: Manual Entry (Current MVP Scope)
**Timeline:** Week 1-4
**Features:**
- Manual entry of weight, height
- Manual entry of basic vitals (heart rate, blood pressure, temperature)
- Web-based interface only
- No mobile integration yet
### Phase 2: Mobile Foundation
**Timeline:** Week 5-8
**Features:**
- Build basic iOS and Android apps
- Implement authentication
- Manual data entry on mobile
- Sync with server
### Phase 3: Health Framework Integration
**Timeline:** Week 9-12
**Features:**
- Implement HealthKit on iOS
- Implement Health Connect on Android
- Support top 5 most important data types:
1. Weight
2. Heart Rate
3. Blood Pressure
4. Sleep (duration)
5. Steps (count)
- Background sync every 15-30 minutes
- Historical data import (last 30 days)
### Phase 4: Expanded Data Types
**Timeline:** Week 13-16
**Features:**
- Add all common data types
- Support for exercise tracking
- Nutrition tracking
- Advanced sleep analysis
- Menstrual cycle tracking
---
## Data Model Recommendations
### Enhanced health_metrics Table
```sql
ALTER TABLE health_metrics ADD COLUMN metric_source VARCHAR(50)
CHECK (metric_source IN ('manual', 'healthkit', 'healthconnect', 'third_party_device', 'unknown'));
ALTER TABLE health_metrics ADD COLUMN source_device_id VARCHAR(255);
-- Stores identifier for source device/app (e.g., "com.apple.health.Health", "com.fitbit.FitbitMobile")
ALTER TABLE health_metrics ADD COLUMN accuracy DECIMAL(5,2);
-- Sensor accuracy for automatic measurements (0.0-1.0, where 1.0 = perfect)
ALTER TABLE health_metrics ADD COLUMN metadata JSONB;
-- Flexible storage for platform-specific data:
-- iOS: {"HKDevice": "iPhone14,2", "HKSource": "com.apple.Health"}
-- Android: {"device": "Samsung Galaxy S21", "package": "com.sec.android.app.health"}
```
### New Table: health_metric_sources
```sql
CREATE TABLE health_metric_sources (
id UUID PRIMARY KEY DEFAULT gen_random_uuid(),
user_id UUID NOT NULL REFERENCES users(id) ON DELETE CASCADE,
platform VARCHAR(20) NOT NULL, -- 'ios' or 'android'
device_name VARCHAR(255),
source_bundle_id VARCHAR(255), -- App/package ID
first_sync TIMESTAMP DEFAULT NOW(),
last_sync TIMESTAMP DEFAULT NOW(),
is_active BOOLEAN DEFAULT TRUE,
UNIQUE(user_id, platform, source_bundle_id)
);
CREATE INDEX idx_metric_sources_user ON health_metric_sources(user_id);
```
### New Table: sync_history
```sql
CREATE TABLE sync_history (
id UUID PRIMARY KEY DEFAULT gen_random_uuid(),
user_id UUID NOT NULL REFERENCES users(id) ON DELETE CASCADE,
platform VARCHAR(20) NOT NULL,
sync_type VARCHAR(50) NOT NULL, -- 'initial', 'incremental', 'manual'
records_imported INTEGER DEFAULT 0,
records_failed INTEGER DEFAULT 0,
sync_duration_seconds INTEGER,
error_message TEXT,
synced_from TIMESTAMP,
synced_to TIMESTAMP,
created_at TIMESTAMP DEFAULT NOW()
);
CREATE INDEX idx_sync_history_user ON sync_history(user_id, created_at DESC);
```
---
## Sync Strategy
### Initial Sync (First Connection)
When user first connects health framework:
1. Request last 30 days of data (common window)
2. Import in batches to avoid overwhelming server
3. Show progress to user
4. Handle errors gracefully
5. Store sync timestamp for incremental updates
### Incremental Sync (Background)
Every 15-30 minutes:
1. Query for new data since last sync
2. Send new records to server
3. Handle conflicts (same metric, multiple sources)
4. Update last sync timestamp
### Conflict Resolution Strategy
When same metric type exists from multiple sources:
1. **Automatic Entry** (sensor/device) > **Manual Entry**
2. **More Recent** > **Older** (for time-series data)
3. **More Accurate** > **Less Accurate** (based on metadata)
4. **User Preference** (if user sets preferred source)
### Battery Optimization
- Limit sync frequency when battery < 20%
- Use WorkManager (Android) and Background Tasks (iOS)
- Batch requests to minimize wake-ups
- Sync only when on Wi-Fi (user preference)
- Respect battery saver mode
---
## Security & Privacy Considerations
### Data Transmission
- **Always use HTTPS** (TLS 1.3)
- **Encrypt sensitive data** at REST on server
- **Never store credentials** on device (use tokens)
- **Certificate pinning** for API calls
### Data Storage
- **Encrypt at rest** using database encryption
- **Separate encryption keys** per user
- **No plaintext passwords** (bcrypt/scrypt/Argon2)
- **Secure key derivation** for data access
### User Privacy
- **Clear permission requests** explaining why data is needed
- **Granular controls** - user chooses what to share
- **Easy data deletion** - "nuke option" from intro.md
- **No data sharing** with third parties without explicit consent
- **Transparent data usage** - show user what's stored
### Compliance
- **GDPR** (Europe)
- **HIPAA** (if handling protected health information in US)
- **CCPA** (California)
- **App Store Review Guidelines** (Apple)
- **Google Play Policy** (Android)
---
## Open Questions & Further Research
### Priority 1 (MVP Blocking)
1. **Conflict Resolution Algorithm**
- What if user manually enters weight but scale also sent data?
- Need comprehensive conflict resolution policy
2. **Background Sync Optimization**
- Optimal sync interval for battery vs data freshness
- How to handle offline scenarios
3. **Data Retention Policy**
- How long to keep historical data?
- Should old data be archived or deleted?
### Priority 2 (Post-MVP)
4. **Third-Party Device Integration**
- Fitbit, Garmin, Oura Ring, Whoop, etc.
- Each requires separate API integration
5. **Data Export Format**
- What format for user downloads?
- JSON, CSV, FHIR (HL7), or custom?
6. **Advanced Analytics**
- Trends, correlations, predictions
- Privacy-preserving computations?
7. **Cross-Platform Sync**
- What if user has both iOS and Android devices?
- How to merge data from both?
### Priority 3 (Future)
8. **Real-Time Monitoring**
- Live heart rate, blood glucose alerts?
- Push notification strategy
9. **Data Visualization**
- Charts, graphs, heatmaps
- What library to use?
10. **International Units**
- Automatic unit conversion based on user location?
- Support for medical vs customary units?
---
## Implementation Checklist
### Pre-Development
- [ ] Finalize data model with source tracking
- [ ] Design conflict resolution algorithm
- [ ] Create API endpoints for bulk data import
- [ ] Set up database encryption
### iOS Development
- [ ] Add HealthKit capability in Xcode
- [ ] Write permission request code
- [ ] Implement HealthKit queries for top 5 data types
- [ ] Implement background sync with BGTaskScheduler
- [ ] Test on physical device (simulator has limited support)
### Android Development
- [ ] Add Health Connect dependencies
- [ ] Add permissions to AndroidManifest
- [ ] Write permission request code
- [ ] Implement Health Connect queries for top 5 data types
- [ ] Implement background sync with WorkManager
- [ ] Test on multiple Android versions/devices
### Backend Development
- [ ] Create bulk import API endpoints
- [ ] Implement conflict resolution logic
- [ ] Add sync history tracking
- [ ] Optimize database indexes for time-series queries
- [ ] Implement data deletion endpoint ("nuke")
### Testing
- [ ] Unit tests for data parsing
- [ ] Integration tests for sync logic
- [ ] Manual testing on physical devices
- [ ] Battery usage profiling
- [ ] Security audit
- [ ] Load testing with thousands of records
---
## Conclusion
**Feasibility:** ✅ **Highly Feasible**
Both mobile platforms provide robust, well-documented frameworks for health data access. The integration is straightforward for common data types (weight, height, heart rate, blood pressure, sleep, steps).
**Recommendation for MVP:**
- Start with **Phase 1** (manual entry) to validate core architecture
- Move to **Phase 2** (mobile apps) for basic platform functionality
- Implement **Phase 3** (health frameworks) with top 5 data types
- Expand in **Phase 4** based on user feedback
**Timeline Estimate:**
- Phase 1: 4 weeks (manual entry web app)
- Phase 2: 4 weeks (mobile app foundation)
- Phase 3: 4 weeks (health framework integration)
- Phase 4: 4 weeks (expanded data types)
**Total to Full Mobile Integration:** ~16 weeks (4 months)
---
## References
### Official Documentation
- [Apple HealthKit Documentation](https://developer.apple.com/documentation/healthkit)
- [Google Health Connect Documentation](https://developer.android.com/health-connect)
- [Apple Human Interface Guidelines - Health](https://developer.apple.com/design/human-interface-guidelines/health)
- [Google Play - Health Apps Policy](https://play.google.com/console/about/health/)
### Data Type References
- [HealthKit HKObjectType Constants](https://developer.apple.com/documentation/healthkit/hkobjecttype)
- [Health Connect Data Types](https://developer.android.com/reference/kotlin/androidx/health/data/class)
- [Common Data Elements - FHIR](https://hl7.org/fhir/observation.html)
### Code Examples
- Apple Sample Code: HKWorkoutSession, HKHealthStore
- Android Sample Code: Health Connect Samples on GitHub
---
**Next Steps:**
1. Review this research with stakeholders
2. Prioritize which data types for MVP
3. Choose mobile development framework (React Native vs native)
4. Begin implementation with Phase 1 (manual entry)

183
docs/adr/mongodb-schema-decision.md Normal file
View file

@ -0,0 +1,183 @@
# MongoDB Schema Design Decision Summary
**Date**: 2026-02-14
**Decision**: **Zero-Knowledge Encryption for All Sensitive Data + Metadata**
---
## Core Principle
**ALL sensitive data AND metadata must be encrypted client-side before reaching MongoDB.**
### Example: Blood Pressure Reading
**Before encryption** (client-side):
```javascript
{
value: "120/80",
type: "blood_pressure",
unit: "mmHg",
date: "2026-02-14T10:30:00Z"
}
```
**After encryption** (stored in MongoDB):
```javascript
{
healthDataId: "health-123",
userId: "user-456",
profileId: "profile-789",
familyId: "family-012",
// Encrypted (value + metadata)
healthData: [
{
encrypted: true,
data: "a1b2c3d4...",
iv: "e5f6g7h8...",
authTag: "i9j0k1l2..."
}
],
// Metadata (plaintext)
createdAt: ISODate("2026-02-14T10:30:00Z"),
updatedAt: ISODate("2026-02-14T10:30:00Z"),
dataSource: "healthKit"
}
```
---
## Collections Summary
| Collection | Purpose | Encrypted Fields | Plaintext Fields |
|-----------|---------|------------------|-----------------|
| **users** | Authentication | encryptedRecoveryPhrase | userId, email, passwordHash, tokenVersion, familyId, familyRole, permissions |
| **families** | Family structure | familyName, familyMetadata | familyId, members[*].userId, members[*].profileId, members[*].role |
| **profiles** | Person profiles | profileName, profileMetadata | profileId, userId, familyId, profileType |
| **health_data** | Health records | healthData[*] (value + metadata) | healthDataId, userId, profileId, familyId, createdAt, updatedAt, dataSource |
| **lab_results** | Lab tests | labData (value + metadata), labMetadata | labResultId, userId, profileId, familyId, createdAt, updatedAt, dataSource |
| **medications** | Medication tracking | medicationData (value + metadata), reminderSchedule | medicationId, userId, profileId, familyId, active, createdAt, updatedAt |
| **appointments** | Medical appointments | appointmentData (value + metadata), reminderSettings | appointmentId, userId, profileId, familyId, createdAt, updatedAt |
| **shares** | Shared data | encryptedData (share-specific password) | shareId, userId, documentId, collectionName, createdAt, expiresAt, accessCount, isRevoked |
| **refresh_tokens** | JWT tokens | None | jti, userId, createdAt, expiresAt, revoked |
---
## Encryption Strategy
### Client-Side Encryption
**Encryption Flow**:
1. User enters health data
2. Client derives encryption key from password (PBKDF2)
3. Client encrypts health data (AES-256-GCM)
4. Client sends encrypted data to server
5. Server stores encrypted data in MongoDB
6. Server NEVER decrypts data
### What Must Be Encrypted
- ✅ **Health data values** (e.g., "120/80")
- ✅ **Health data metadata** (e.g., "blood_pressure", "mmHg")
- ✅ **Lab test results** (e.g., "cholesterol", "200", "LabCorp")
- ✅ **Medication data** (e.g., "Aspirin", "100mg", "daily")
- ✅ **Appointment data** (e.g., "checkup", "Dr. Smith")
- ✅ **Profile data** (e.g., "John Doe", "1990-01-01")
- ✅ **Family data** (e.g., "Smith Family", "123 Main St")
### What Can Be Plaintext
- ✅ **User IDs** (userId, profileId, familyId) - for queries
- ✅ **Email addresses** - for authentication
- ✅ **Dates** (createdAt, updatedAt) - for sorting
- ✅ **Data sources** (healthKit, googleFit) - for analytics
- ✅ **Tags** (cardio, daily) - for client-side search
---
## Privacy-Preserving Queries
### 1. Plaintext Queries (Recommended)
**Query by plaintext fields only**:
```javascript
const healthData = await db.health_data.find({
userId: 'user-123', // Plaintext ✅
profileId: 'profile-456', // Plaintext ✅
familyId: 'family-789' // Plaintext ✅
}).toArray();
// Client decrypts healthData[i].healthData[j]
```
### 2. Tagging System (Encrypted Search)
**Client adds searchable tags to encrypted data**:
```javascript
const healthData = await db.health_data.find({
userId: 'user-123',
tags: { $in: ['cardio', 'daily'] } // Plaintext tags ✅
}).toArray();
// Client decrypts healthData[i].healthData[j]
```
### 3. Date Range Queries (Plaintext Dates)
**Store dates as plaintext** (for range queries):
```javascript
const healthData = await db.health_data.find({
userId: 'user-123',
date: {
$gte: ISODate("2026-02-01"),
$lte: ISODate("2026-02-28")
}
}).toArray();
// Client decrypts healthData[i].healthData[j]
```
---
## Technology Stack
### Backend (Axum + MongoDB)
- **Axum 0.7.x**: Web framework
- **MongoDB 6.0+**: Database
- **Rust**: Server language
### Client (React Native + React)
- **AES-256-GCM**: Encryption algorithm
- **PBKDF2**: Key derivation function
- **Crypto API**: Node.js crypto / react-native-quick-crypto
---
## Implementation Timeline
- **Week 1**: Create MongoDB indexes
- **Week 1-2**: Implement client-side encryption (React Native + React)
- **Week 2-3**: Implement server-side API (Axum + MongoDB)
- **Week 3**: Test encryption flow
- **Week 3-4**: Test data migration (key rotation)
- **Week 4**: Test privacy-preserving queries
- **Week 4-5**: Performance testing
**Total**: 4-5 weeks
---
## Next Steps
1. Create MongoDB indexes for all collections
2. Implement client-side encryption (React Native + React)
3. Implement server-side API (Axum + MongoDB)
4. Test encryption flow (end-to-end)
5. Test data migration (key rotation)
6. Test privacy-preserving queries
7. Performance testing
8. Create API documentation
---
## References
- [Comprehensive MongoDB Schema Research](./2026-02-14-mongodb-schema-design-research.md)
- [Normogen Encryption Guide](../encryption.md)
- [JWT Authentication Research](./2026-02-14-jwt-authentication-research.md)
- [Technology Stack Decisions](./2026-02-14-tech-stack-decision.md)

312
docs/adr/monorepo-structure.md Normal file
View file

@ -0,0 +1,312 @@
# Monorepo Structure
## Repository Layout
```
normogen/ # Root Forgejo repository
├── backend/ # Rust backend (Axum + MongoDB)
│ ├── src/ # Source code
│ │ ├── main.rs # Entry point
│ │ ├── auth/ # Authentication
│ │ │ ├── mod.rs
│ │ │ ├── jwt_service.rs
│ │ │ ├── claims.rs
│ │ │ └── middleware.rs
│ │ ├── api/ # API endpoints
│ │ │ ├── mod.rs
│ │ │ ├── users.rs
│ │ │ ├── families.rs
│ │ │ ├── profiles.rs
│ │ │ ├── health_data.rs
│ │ │ ├── lab_results.rs
│ │ │ ├── medications.rs
│ │ │ ├── appointments.rs
│ │ │ └── shares.rs
│ │ ├── db/ # Database
│ │ │ ├── mod.rs
│ │ │ ├── mongo.rs
│ │ │ ├── models.rs
│ │ │ └── repositories.rs
│ │ ├── config/ # Configuration
│ │ │ ├── mod.rs
│ │ │ ├── app.rs
│ │ │ ├── jwt.rs
│ │ │ ├── mongo.rs
│ │ │ └── cors.rs
│ │ ├── middleware/ # Middleware
│ │ │ ├── mod.rs
│ │ │ ├── auth.rs
│ │ │ ├── logging.rs
│ │ │ └── rate_limit.rs
│ │ ├── utils/ # Utilities
│ │ │ ├── mod.rs
│ │ │ ├── crypto.rs
│ │ │ └── validation.rs
│ │ └── error.rs # Error types
│ ├── docker/
│ │ ├── Dockerfile # Production build
│ │ └── Dockerfile.dev # Development build
│ ├── config/
│ │ ├── .env.example # Environment template
│ │ └── defaults.env # Default values
│ ├── k8s/ # Kubernetes manifests (future)
│ │ ├── base/
│ │ └── overlays/
│ ├── Cargo.toml # Dependencies
│ ├── Cargo.lock # Lock file
│ ├── docker-compose.yml # Production deployment
│ ├── docker-compose.dev.yml # Development deployment
│ └── README.md # Backend README
│
├── mobile/ # React Native (iOS + Android)
│ ├── src/ # Source code
│ │ ├── components/ # Reusable components
│ │ │ ├── common/
│ │ │ ├── health/
│ │ │ ├── lab/
│ │ │ └── medication/
│ │ ├── screens/ # Screen components
│ │ │ ├── auth/
│ │ │ ├── home/
│ │ │ ├── family/
│ │ │ ├── profile/
│ │ │ ├── health/
│ │ │ ├── lab/
│ │ │ └── settings/
│ │ ├── navigation/ # Navigation config
│ │ │ ├── AppNavigator.tsx
│ │ │ ├── AuthNavigator.tsx
│ │ │ └── LinkingConfiguration.tsx
│ │ ├── store/ # Redux store
│ │ │ ├── slices/
│ │ │ │ ├── authSlice.ts
│ │ │ │ ├── userSlice.ts
│ │ │ │ ├── familySlice.ts
│ │ │ │ ├── profileSlice.ts
│ │ │ │ └── healthDataSlice.ts
│ │ │ └── store.ts
│ │ ├── services/ # API services
│ │ │ ├── api.ts # Axios client
│ │ │ ├── authService.ts
│ │ │ ├── userService.ts
│ │ │ └── healthDataService.ts
│ │ ├── utils/ # Utilities
│ │ │ ├── encryption.ts # Client-side encryption
│ │ │ ├── validation.ts
│ │ │ └── constants.ts
│ │ ├── hooks/ # Custom hooks
│ │ │ ├── useAuth.ts
│ │ │ └── useEncryptedStorage.ts
│ │ ├── types/ # TypeScript types
│ │ │ └── index.ts
│ │ └── assets/ # Images, fonts
│ ├── android/ # Android native code
│ │ ├── app/
│ │ └── build.gradle
│ ├── ios/ # iOS native code
│ │ ├── Normogen
│ │ └── Podfile
│ ├── package.json
│ ├── tsconfig.json
│ ├── App.tsx # Entry component
│ ├── README.md
│ └── .env.example
│
├── web/ # React web app
│ ├── src/ # Source code
│ │ ├── components/ # Reusable components
│ │ │ ├── common/
│ │ │ ├── health/
│ │ │ ├── lab/
│ │ │ └── charts/
│ │ ├── pages/ # Page components
│ │ │ ├── auth/
│ │ │ ├── home/
│ │ │ ├── family/
│ │ │ ├── profile/
│ │ │ ├── health/
│ │ │ ├── lab/
│ │ │ └── settings/
│ │ ├── store/ # Redux store (shared with mobile)
│ │ │ ├── slices/
│ │ │ └── store.ts
│ │ ├── services/ # API services (shared with mobile)
│ │ │ ├── api.ts
│ │ │ └── ...
│ │ ├── utils/ # Utilities (shared with mobile)
│ │ │ ├── encryption.ts
│ │ │ └── ...
│ │ ├── hooks/ # Custom hooks
│ │ │ └── ...
│ │ ├── types/ # TypeScript types (shared)
│ │ │ └── index.ts
│ │ ├── styles/ # CSS/global styles
│ │ │ └── global.css
│ │ └── App.tsx
│ ├── package.json
│ ├── tsconfig.json
│ ├── index.html
│ ├── vite.config.ts # Vite config
│ └── README.md
│
├── shared/ # Shared TypeScript code
│ ├── src/
│ │ ├── types/ # Shared type definitions
│ │ │ ├── user.ts
│ │ │ ├── family.ts
│ │ │ ├── profile.ts
│ │ │ ├── healthData.ts
│ │ │ ├── labResults.ts
│ │ │ ├── medications.ts
│ │ │ ├── appointments.ts
│ │ │ ├── shares.ts
│ │ │ └── api.ts
│ │ ├── validation/ # Zod schemas
│ │ │ ├── user.ts
│ │ │ ├── family.ts
│ │ │ └── healthData.ts
│ │ ├── encryption/ # Encryption utilities
│ │ │ ├── crypto.ts
│ │ │ └── keyDerivation.ts
│ │ ├── api/ # Shared API client
│ │ │ ├── client.ts
│ │ │ └── endpoints.ts
│ │ └── constants/ # Shared constants
│ │ ├── routes.ts
│ │ └── config.ts
│ ├── package.json
│ ├── tsconfig.json
│ └── README.md
│
├── thoughts/ # Research & design docs
│ ├── research/
│ │ ├── 2026-02-14-rust-framework-comparison.md
│ │ ├── 2026-02-14-rust-framework-performance-research.md
│ │ ├── 2026-02-14-performance-findings.md
│ │ ├── 2026-02-14-research-summary.md
│ │ ├── 2026-02-14-frontend-mobile-research.md
│ │ ├── 2026-02-14-frontend-decision-summary.md
│ │ ├── 2026-02-14-state-management-research.md
│ │ ├── 2026-02-14-state-management-decision.md
│ │ ├── 2026-02-14-jwt-authentication-research.md
│ │ ├── 2026-02-14-jwt-authentication-decision.md
│ │ ├── 2026-02-14-mongodb-schema-design-research.md
│ │ ├── 2026-02-14-mongodb-schema-decision.md
│ │ ├── 2026-02-14-backend-deployment-constraints.md
│ │ └── 2026-02-14-monorepo-structure.md
│ └── research/
│
├── .gitignore # Root gitignore
├── README.md # Root README
├── docker-compose.root.yml # Run all services (optional)
└── .forgejo/ # Forgejo CI/CD workflows
└── workflows/
├── backend-build.yml
├── mobile-build.yml
└── web-build.yml
```
## Directory Creation Commands
```bash
# Create root directories
mkdir -p backend/{src/{auth,api,db,config,middleware,utils},docker,config,k8s/base,k8s/overlays/homelab,k8s/overlays/production}
mkdir -p mobile/{src/{components/{common,health,lab,medication},screens/{auth,home,family,profile,health,lab,settings},navigation,store/slices,services,utils,hooks,types,assets},android,ios}
mkdir -p web/{src/{components/{common,health,lab,charts},pages/{auth,home,family,profile,health,lab,settings},store/slices,services,utils,hooks,types,styles}}
mkdir -p shared/src/{types,validation,encryption,api,constants}
mkdir -p thoughts/research
mkdir -p .forgejo/workflows
# Create placeholder files
touch backend/src/{main.rs,auth/mod.rs,api/mod.rs,db/mod.rs,config/mod.rs,middleware/mod.rs,utils/mod.rs,error.rs}
touch mobile/src/{App.tsx,navigation/AppNavigator.tsx,store/store.ts,services/api.ts,utils/encryption.ts}
touch web/src/{App.tsx,store/store.ts,services/api.ts,utils/encryption.ts}
touch shared/src/{types/index.ts,validation/index.ts,encryption/crypto.ts,api/client.ts}
```
## Git Strategy
### Branch Strategy
- `main`: Production releases
- `develop`: Development integration
- `feature/backend-*`: Backend features
- `feature/mobile-*`: Mobile features
- `feature/web-*`: Web features
- `feature/shared-*`: Shared code features
### Commit Message Format
```
<type>(<scope>): <subject>
<body>
<footer>
```
Types: feat, fix, docs, style, refactor, test, chore
Scopes: backend, mobile, web, shared, ci/cd
Examples:
- `feat(backend): Implement JWT authentication with refresh tokens`
- `fix(mobile): Resolve encryption key storage issue`
- `docs(shared): Update API type definitions`
- `chore(ci/cd): Add Forgejo workflow for backend builds`
## Shared Code Management
### TypeScript Package
The `shared/` directory contains TypeScript code shared between mobile and web:
- Type definitions (API models)
- Validation schemas (Zod)
- Encryption utilities
- API client
- Constants
### Usage in Mobile/Web
```json
// mobile/package.json and web/package.json
{
"dependencies": {
"shared": "file:../shared"
}
}
```
### Watch Mode for Development
```bash
# In shared/ directory
npm run watch # Watch and rebuild on changes
# In mobile/ and web/ directories
# Changes to shared/ are automatically picked up
```
## Next Steps
1. **Initialize Monorepo Structure**
- Create all directories
- Create placeholder files
- Update root .gitignore
2. **Backend Initialization**
- Initialize Rust project (backend/)
- Setup Cargo.toml
- Create docker-compose files
- Create Dockerfiles
3. **Shared Code Setup**
- Initialize TypeScript project (shared/)
- Setup type definitions
- Setup Zod validation schemas
- Setup encryption utilities
4. **Mobile Setup** (Phase 3)
- Initialize React Native project
- Setup Redux Toolkit
- Setup navigation
5. **Web Setup** (Phase 3)
- Initialize React project
- Setup Redux Toolkit
- Setup routing

106
docs/adr/state-management-decision.md Normal file
View file

@ -0,0 +1,106 @@
# State Management Decision Summary
**Date**: 2026-02-14
**Decision**: **Redux Toolkit 2.x**
---
## Scorecard
| Criterion | Redux Toolkit | Zustand | Jotai | Weight |
|-----------|---------------|----------|--------|--------|
| Code Sharing | 10 | 10 | 10 | Critical |
| Bundle Size | 7 | 10 | 10 | Critical |
| TypeScript | 10 | 10 | 10 | Critical |
| Complex State | 10 | 7 | 5 | Critical |
| Offline Sync | 10 | 7 | 5 | Critical |
| **Weighted Score** | **9.2** | 8.6 | 7.6 | - |
---
## Decision: Redux Toolkit 2.x
**Score**: 9.2/10
### Key Advantages
1. **Best for Complex State**
- Family structure, multi-person profiles, permissions
- Built-in normalization (createEntityAdapter)
- Predictable state updates
- Time-travel debugging
2. **Best for Offline Sync**
- RTK Query for server state management
- Optimistic updates
- Background sync support
- Battle-tested offline patterns
3. **Best Ecosystem**
- Largest ecosystem
- Most resources, tutorials, examples
- Most production deployments
- Easiest to hire developers
4. **Best Developer Experience**
- Time-travel debugging
- Predictable state updates
- Easy to debug
### Trade-offs
- More boilerplate: More code, but clearer structure
- Steeper learning curve: More concepts, but better patterns
- Larger bundle: 60KB vs 3KB (negligible impact on 50-100MB app)
---
## Technology Stack
### Shared (Monorepo)
- **State Management**: Redux Toolkit 2.x
- **Data Fetching**: RTK Query 2.x
- **Async Thunks**: createAsyncThunk
- **Persistence**: Redux Persist 6.x
- **Selectors**: Reselect 5.x
- **DevTools**: Redux DevTools
---
## Alternative Considered: Zustand
**Score**: 8.6/10
**Why Redux Toolkit wins**:
- Better for complex state (family structure)
- Better for offline sync (RTK Query)
- Larger ecosystem (more resources)
**When to use Zustand instead**:
- If team has no Redux experience
- If state is simpler (no family structure)
- If development speed is more important
---
## Next Steps
1. Implement Redux Toolkit POC
2. Create family structure state slice
3. Implement RTK Query for server state
4. Test offline synchronization
5. Test encrypted data caching
6. Make final decision
---
## Implementation Timeline
- Setup Redux Toolkit: 1 day
- Create state slices: 2-3 days
- Implement RTK Query: 2-3 days
- Implement offline sync: 3-5 days
- Test encrypted caching: 2-3 days
- Evaluate DX: 1-2 days
**Total**: 11-17 days (2-3 weeks)

316
docs/adr/tech-stack-decision.md Normal file
View file

@ -0,0 +1,316 @@
# Technology Stack Decisions
**Last Updated**: 2026-02-14
---
## Decisions Made
### 1. Rust Web Framework: Axum
**Decision**: Axum 0.7.x
**Rationale**:
- Superior I/O performance for encrypted data transfer
- Better streaming support for large encrypted responses
- Lower memory usage for concurrent connections
- Tower middleware ecosystem
- Excellent async patterns for lazy loading
**Reference**: [2026-02-14-performance-findings.md](./2026-02-14-performance-findings.md)
---
### 2. Mobile Framework: React Native
**Decision**: React Native 0.73+ for iOS + Android
**Platform Strategy**:
- **Primary**: Mobile apps (iOS + Android) - Daily health tracking, sensor integration
- **Secondary**: Web browser - Extensive reporting, visualization, profile management
**Rationale**:
- **70-80% code sharing** between mobile and web (single language: TypeScript)
- **Health sensor integration**: react-native-health (HealthKit), react-native-google-fit (Health Connect)
- **QR code scanning**: react-native-camera
- **Encryption**: react-native-quick-crypto (AES-256-GCM, PBKDF2)
- **Web charts**: Recharts for React (beautiful visualizations)
- **Team skills**: Single language (JavaScript/TypeScript) reduces development cost
- **Time to market**: Faster than native or Flutter
**Reference**: [2026-02-14-frontend-mobile-research.md](./2026-02-14-frontend-mobile-research.md)
---
### 3. Web Framework: React
**Decision**: React 18+ for web companion app
**Rationale**:
- **70-80% code sharing** with React Native (business logic, state, API, encryption)
- **Charts**: Recharts for beautiful health data visualizations
- **Ecosystem**: Largest npm ecosystem
- **Team skills**: Single language (TypeScript)
---
### 4. State Management: Redux Toolkit
**Decision**: Redux Toolkit 2.x for React Native + React
**Score**: 9.2/10
**Rationale**:
- **Best for complex state**: Family structure, multi-person profiles, permissions
- **Built-in normalization**: createEntityAdapter for efficient data management
- **Best for offline sync**: RTK Query for server state, optimistic updates, background sync
- **Largest ecosystem**: Most resources, tutorials, examples, production deployments
- **Best developer experience**: Time-travel debugging, predictable state updates
- **TypeScript**: Excellent support, full type safety
- **Code sharing**: 100% between React Native and React
**Trade-offs**:
- More boilerplate: More code, but clearer structure
- Steeper learning curve: More concepts, but better patterns
- Larger bundle: 60KB vs 3KB (negligible impact on 50-100MB app)
**Reference**: [2026-02-14-state-management-research.md](./2026-02-14-state-management-research.md)
---
### 5. Authentication: JWT with Refresh Tokens
**Decision**: JWT (JSON Web Tokens) with Refresh Tokens + Recovery Phrases
**Score**: 9.5/10
**Rationale**:
- **Stateless design**: Scales to 1000+ concurrent connections (no session storage)
- **Mobile-friendly**: Works perfectly with React Native (AsyncStorage)
- **Zero-knowledge compatible**: Integrates with recovery phrases from encryption.md
- **Token revocation**: Refresh token blacklist (MongoDB) + token versioning
- **Token rotation**: Prevents reuse of stolen refresh tokens
- **Family access control**: Permissions in JWT claims (parent, child, elderly)
- **Security best practices**: Short-lived access tokens (15 min), long-lived refresh tokens (30 days)
**Trade-offs**:
- Revocation requires storage (MongoDB for refresh tokens, optional Redis for access tokens)
- More complex than sessions (but better for scaling)
**Reference**: [2026-02-14-jwt-authentication-research.md](./2026-02-14-jwt-authentication-research.md)
---
### 6. Database: MongoDB with Zero-Knowledge Encryption
**Decision**: MongoDB 6.0+ with client-side encryption (ALL sensitive data + metadata)
**Score**: 9.8/10
**Core Principle**: **ALL sensitive data AND metadata must be encrypted client-side before reaching MongoDB**
**Example: Blood Pressure Reading**:
```javascript
// Before encryption (client-side)
{
value: "120/80",
type: "blood_pressure",
unit: "mmHg",
date: "2026-02-14T10:30:00Z"
}
// After encryption (stored in MongoDB)
{
healthDataId: "health-123",
userId: "user-456",
profileId: "profile-789",
// Encrypted (value + metadata)
healthData: [
{
encrypted: true,
data: "a1b2c3d4...",
iv: "e5f6g7h8...",
authTag: "i9j0k1l2..."
}
]
}
```
**Rationale**:
- **Zero-knowledge**: Server NEVER decrypts data
- **Metadata encryption**: Health data type, unit, doctor, lab ALL encrypted
- **Privacy-preserving**: No plaintext metadata leaks
- **Client-side encryption**: AES-256-GCM, PBKDF2 key derivation
- **Plaintext queries**: Query by userId, profileId, familyId, date, tags
- **Tagging system**: Client adds searchable tags for encrypted data
- **Flexible schema**: MongoDB document structure fits health data
- **Scalable**: Horizontal scaling with sharding
**Collections**:
- **users**: Authentication, profiles, family relationships
- **families**: Family structure, encrypted family name/metadata
- **profiles**: Person profiles, encrypted profile name/metadata
- **health_data**: Encrypted health records (value + metadata)
- **lab_results**: Encrypted lab data (value + metadata)
- **medications**: Encrypted medication data + reminders
- **appointments**: Encrypted appointment data + reminders
- **shares**: Time-limited access to shared data
- **refresh_tokens**: JWT refresh token storage
**What Must Be Encrypted**:
- ✅ Health data values (e.g., "120/80")
- ✅ Health data metadata (e.g., "blood_pressure", "mmHg")
- ✅ Lab test results (e.g., "cholesterol", "200", "LabCorp")
- ✅ Medication data (e.g., "Aspirin", "100mg", "daily")
- ✅ Appointment data (e.g., "checkup", "Dr. Smith")
- ✅ Profile data (e.g., "John Doe", "1990-01-01")
- ✅ Family data (e.g., "Smith Family", "123 Main St")
**What Can Be Plaintext**:
- ✅ User IDs (userId, profileId, familyId) - for queries
- ✅ Email addresses - for authentication
- ✅ Dates (createdAt, updatedAt) - for sorting
- ✅ Data sources (healthKit, googleFit) - for analytics
- ✅ Tags (cardio, daily) - for client-side search
**Reference**: [2026-02-14-mongodb-schema-design-research.md](./2026-02-14-mongodb-schema-design-research.md)
---
## Technology Stack Summary
### Backend
- **Framework**: Axum 0.7.x
- **Runtime**: Tokio 1.x
- **Middleware**: Tower, Tower-HTTP
- **Authentication**: JWT with refresh tokens
- **Database**: MongoDB 6.0+ (with zero-knowledge encryption)
- **Language**: Rust
### Mobile (iOS + Android)
- **Framework**: React Native 0.73+
- **Language**: TypeScript
- **State Management**: Redux Toolkit 2.x
- **Data Fetching**: RTK Query 2.x
- **Authentication**: JWT with AsyncStorage
- **Navigation**: React Navigation
- **Health Sensors**:
- react-native-health (iOS HealthKit)
- react-native-google-fit (Android Health Connect)
- **QR Scanning**: react-native-camera
- **Encryption**: react-native-quick-crypto
- **Persistence**: Redux Persist 6.x (AsyncStorage)
- **HTTP**: Axios
### Web
- **Framework**: React 18+
- **Language**: TypeScript
- **State Management**: Redux Toolkit 2.x
- **Data Fetching**: RTK Query 2.x
- **Authentication**: JWT with localStorage (or httpOnly cookies)
- **Routing**: React Router
- **Charts**: Recharts
- **Persistence**: Redux Persist 6.x (localStorage)
- **HTTP**: Axios
### Shared (Monorepo)
- **Language**: TypeScript
- **State Management**: Redux Toolkit 2.x
- **Reducers**: Shared reducers (user, family, encryption)
- **Selectors**: Shared selectors (Reselect 5.x)
- **API**: Axios
- **Encryption**: AES-256-GCM, PBKDF2
- **Validation**: Zod
- **Date**: date-fns
- **Utilities**: Shared package
---
## All Major Decisions Complete ✅
1. ✅ Rust Framework: Axum 0.7.x
2. ✅ Mobile Framework: React Native 0.73+
3. ✅ Web Framework: React 18+
4. ✅ State Management: Redux Toolkit 2.x
5. ✅ Authentication: JWT with refresh tokens
6. ✅ Database: MongoDB 6.0+ with zero-knowledge encryption
---
## Implementation Phases
- **Phase 1: Research** (COMPLETE)
- Rust framework selection
- Mobile/web framework selection
- State management selection
- Authentication design
- Database schema design
- **Phase 2: Backend Development** (NEXT)
- Axum server setup
- MongoDB connection
- JWT authentication
- CRUD API endpoints
- Zero-knowledge encryption (client-side)
- **Phase 3: Mobile Development** (AFTER BACKEND)
- React Native app setup
- Redux Toolkit setup
- JWT authentication
- Health sensor integration
- QR code scanning
- Encryption implementation
- **Phase 4: Web Development** (PARALLEL WITH MOBILE)
- React app setup
- Redux Toolkit setup
- JWT authentication
- Charts and visualizations
- Profile management
- Encryption implementation
---
## Next Steps
1. **Backend Development** (Axum + MongoDB)
- Create Axum server
- Setup MongoDB connection
- Implement JWT authentication
- Create MongoDB indexes
- Implement CRUD endpoints
2. **Client-Side Encryption** (React Native + React)
- Implement AES-256-GCM encryption
- Implement PBKDF2 key derivation
- Create encryption utilities
- Test encryption flow
3. **API Development** (Axum)
- Users API (register, login, logout)
- Families API (create, update, delete)
- Profiles API (CRUD)
- Health Data API (CRUD)
- Lab Results API (import via QR)
- Medications API (reminders)
- Appointments API (reminders)
- Shares API (time-limited access)
---
## Timeline Estimate
- **Phase 1: Research** (COMPLETE)
- **Phase 2: Backend Development** (8-10 weeks)
- **Phase 3: Mobile Development** (8-12 weeks)
- **Phase 4: Web Development** (4-6 weeks)
- **Phase 5: Testing & Polish** (4-6 weeks)
**Total**: 24-34 weeks (6-8.5 months)
---
## References
- [Axum Performance Research](./2026-02-14-performance-findings.md)
- [Frontend Mobile Research](./2026-02-14-frontend-mobile-research.md)
- [State Management Research](./2026-02-14-state-management-research.md)
- [JWT Authentication Research](./2026-02-14-jwt-authentication-research.md)
- [MongoDB Schema Design](./2026-02-14-mongodb-schema-design-research.md)
- [Normogen Encryption Guide](../encryption.md)
- [Project Introduction](../introduction.md)

0
docs/testing/API_TEST_RESULTS_SOLARIA.md → docs/archive/API_TEST_RESULTS_SOLARIA.md
View file

539
docs/archive/CI-CD-FINAL-SOLUTION.md Normal file
View file

@ -0,0 +1,539 @@
# CI/CD Implementation - Final Solution
**Date**: 2026-03-18
**Status**: ✅ Production Ready (with limitations)
**Forgejo URL**: http://gitea.solivarez.com.ar/alvaro/normogen/actions
**Final Commit**: `a57bfca`
---
## Executive Summary
Successfully implemented **format checking**, **PR validation**, and **build verification** for the Forgejo CI/CD pipeline. **Docker builds are handled separately** due to infrastructure limitations with Docker-in-Docker (DinD) services in Forgejo's containerized runner environment.
---
## What's Working ✅
### 1. Format Checking (Strict)
- ✅ **Job**: `format`
- ✅ **Status**: PASSING
- ✅ **Implementation**:
- Uses `rust:latest` container
- Installs Node.js for checkout compatibility
- Runs `cargo fmt --all -- --check`
- **Strict enforcement** - fails if code is not properly formatted
- ✅ **Runtime**: ~30 seconds
### 2. Clippy Linting (Non-Strict)
- ✅ **Job**: `clippy`
- ✅ **Status**: PASSING
- ✅ **Implementation**:
- Uses `rust:latest` container
- Runs `cargo clippy --all-targets --all-features`
- **Non-strict mode** - shows warnings but doesn't fail build
- Allows for smoother CI pipeline
- ✅ **Runtime**: ~45 seconds
### 3. Build Verification
- ✅ **Job**: `build`
- ✅ **Status**: PASSING
- ✅ **Implementation**:
- Uses `rust:latest` container
- Runs `cargo build --release`
- Validates code compiles successfully
- Creates production-ready binary
- ✅ **Runtime**: ~60 seconds
### 4. PR Validation
- ✅ **Triggers**:
- `push` to `main` and `develop`
- `pull_request` to `main` and `develop`
- ✅ **Automated checks** on all PRs
- ✅ **Merge protection** - blocks merge if checks fail
---
## What's Not Working in CI ❌
### Docker Builds
**Problem**: DNS/Network resolution issues with DinD services
**Technical Details**:
- Forgejo runner creates **temporary isolated networks** for each job
- DinD service runs in one network (e.g., `WORKFLOW-abc123`)
- Docker build job runs in another network (e.g., `WORKFLOW-def456`)
- Jobs **cannot resolve service hostnames** across networks
- Error: `Cannot connect to Docker daemon` or `dial tcp: lookup docker-in-docker: no such host`
**Attempts Made**:
1. ❌ Socket mount (`/var/run/docker.sock:/var/run/docker.sock`)
- Socket not accessible in container
2. ❌ DinD service with TCP endpoint
- DNS resolution fails across networks
3. ❌ Buildx with DinD
- Same DNS issues
4. ❌ Various service names and configurations
- All suffer from network isolation
**Root Cause**:
```
┌─────────────────────────┐
│ Forgejo Runner │
│ │
│ ┌──────────────────┐ │
│ │ format job │ │
│ │ Network: A │ │
│ └──────────────────┘ │
│ │
│ ┌──────────────────┐ │
│ │ clippy job │ │
│ │ Network: B │ │
│ └──────────────────┘ │
│ │
│ ┌──────────────────┐ │
│ │ build job │ │
│ │ Network: C │ │
│ └──────────────────┘ │
│ │
│ ┌──────────────────┐ │
│ │ DinD service │ │
│ │ Network: D │ │
│ └──────────────────┘ │
│ │
│ ❌ Networks A, B, C │
│ cannot connect to │
│ Network D (DinD) │
└─────────────────────────┘
```
---
## Solution: Separate Docker Builds 🎯
### Docker Builds Are Done Separately
**1. Local Development**
```bash
# Build locally for testing
cd backend
docker build -f docker/Dockerfile -t normogen-backend:latest .
docker run -p 8000:8080 normogen-backend:latest
```
**2. Deployment to Solaria**
```bash
# Use existing deployment scripts
cd docs/deployment
./deploy-to-solaria.sh
```
This script:
- SSHs into Solaria
- Pulls latest code
- Builds Docker image on Solaria directly
- Deploys using docker-compose
**3. Production Registry** (Future)
When a container registry is available:
- Set up registry (e.g., Harbor, GitLab registry)
- Configure registry credentials in Forgejo secrets
- Re-enable docker-build in CI with registry push
- Use BuildKit with registry caching
---
## Current CI Workflow
```
┌─────────────┐ ┌─────────────┐
│ Format │ │ Clippy │ ← Parallel execution (~75s total)
│ (strict) │ │ (non-strict)│
└──────┬──────┘ └──────┬──────┘
│ │
└────────┬───────┘
▼
┌─────────────┐
│ Build │ ← Sequential (~60s)
└──────┬──────┘
▼
✅ SUCCESS
```
**Total CI Time**: ~2.5 minutes
---
## Technical Implementation
### Rust Version
```yaml
container:
image: rust:latest # Uses latest Rust (currently 1.85+)
```
**Why**: Latest Rust includes `edition2024` support required by dependencies.
### Node.js Installation
```yaml
- name: Install Node.js for checkout
run: |
apt-get update
apt-get install -y curl gnupg
curl -fsSL https://deb.nodesource.com/setup_20.x | bash -
apt-get install -y nodejs
- name: Checkout code
uses: actions/checkout@v4
```
**Why**: `actions/checkout@v4` is written in Node.js and requires Node runtime.
### Format Check (Strict)
```yaml
- name: Check formatting
working-directory: ./backend
run: cargo fmt --all -- --check
```
**Behavior**:
- ❌ Fails if code is not properly formatted
- ✅ Passes only if code matches rustfmt rules
- 🔄 Fix: Run `cargo fmt --all` locally
### Clippy (Non-Strict)
```yaml
- name: Run Clippy
working-directory: ./backend
run: cargo clippy --all-targets --all-features
```
**Behavior**:
- ✅ Shows warnings but doesn't fail
- 📊 Warnings are visible in CI logs
- 🎯 Allows for smoother CI pipeline
- 📝 Review warnings and fix as needed
### Build Verification
```yaml
- name: Build release binary
working-directory: ./backend
run: cargo build --release --verbose
```
**Behavior**:
- ✅ Validates code compiles
- ✅ Creates optimized binary
- 📦 Binary size: ~21 MB
---
## Commits History
```
a57bfca fix(ci): remove docker-build due to DNS/network issues with DinD
7b50dc2 fix(ci): use working DinD configuration from commit 3b570e7
16434c6 fix(ci): revert to DinD service for docker-build
cd7b7db fix(ci): add Node.js to docker-build and simplify Docker build
6935992 fix(ci): use rust:latest for edition2024 support
68bfb4e fix(ci): upgrade Rust from 1.83 to 1.84 for edition2024 support
6d58730 fix(ci): regenerate Cargo.lock to fix dependency parsing issue
43368d0 fix(ci): make clippy non-strict and fix domain spelling
7399049 fix(ci): add rustup component install for clippy
ed2bb0c fix(ci): add Node.js installation for checkout action compatibility
```
**Total**: 11 commits to reach working solution
---
## Files Modified
```
.forgejo/workflows/lint-and-build.yml # CI workflow (109 lines)
backend/Cargo.lock # Updated dependencies
backend/src/services/interaction_service.rs # Auto-formatted
```
---
## Documentation Created
1. **CI-IMPROVEMENTS.md** (428 lines)
- Comprehensive technical documentation
- Architecture decisions
- Troubleshooting guide
2. **CI-QUICK-REFERENCE.md** (94 lines)
- Quick reference for developers
- Common commands
- Job descriptions
3. **test-ci-locally.sh** (100 lines, executable)
- Pre-commit validation script
- Tests all CI checks locally
4. **CI-CD-FINAL-SOLUTION.md** (this file)
- Final implementation summary
- Explains Docker build decision
- Provides alternatives
---
## Developer Guide
### Before Pushing Code
**1. Run Local Validation**
```bash
./scripts/test-ci-locally.sh
```
This checks:
- ✅ Code formatting
- ✅ Clippy warnings
- ✅ Build compilation
- ✅ Binary creation
**2. Fix Any Issues**
```bash
cd backend
# Fix formatting
cargo fmt --all
# Fix clippy warnings (review and fix as needed)
cargo clippy --all-targets --all-features
# Build to verify
cargo build --release
```
**3. Commit and Push**
```bash
git add .
git commit -m "your changes"
git push origin main
```
### Creating Pull Requests
1. Create PR from feature branch to `main` or `develop`
2. CI automatically runs:
- ✅ Format check (strict)
- ✅ Clippy lint (non-strict)
- ✅ Build verification
3. **All checks must pass before merging**
4. Review any clippy warnings in CI logs
### Building Docker Images
**Option 1: Local Development**
```bash
cd backend
docker build -f docker/Dockerfile -t normogen-backend:latest .
docker run -p 8000:8080 normogen-backend:latest
```
**Option 2: Deploy to Solaria**
```bash
cd docs/deployment
./deploy-to-solaria.sh
```
This script handles everything on Solaria.
**Option 3: Manual on Solaria**
```bash
ssh alvaro@solaria
cd ~/normogen/backend
docker build -f docker/Dockerfile -t normogen-backend:latest .
docker-compose up -d --build
```
---
## Future Enhancements
### Short-term
1. ✅ **Code Coverage** (cargo-tarpaulin)
- Add coverage reporting job
- Upload coverage artifacts
- Track coverage trends
2. ✅ **Integration Tests** (MongoDB service)
- Add MongoDB as a service
- Run full test suite
- Currently commented out
### Medium-term
3. ✅ **Security Scanning** (cargo-audit)
- Check for vulnerabilities
- Fail on high-severity issues
- Automated dependency updates
4. ✅ **Container Registry**
- Set up Harbor or GitLab registry
- Configure Forgejo secrets
- Re-enable docker-build with push
- Use BuildKit with registry caching
### Long-term
5. ✅ **Performance Benchmarking**
- Benchmark critical paths
- Track performance over time
- Alert on regressions
6. ✅ **Multi-platform Builds**
- Build for ARM64, AMD64
- Use Buildx for cross-compilation
- Publish multi-arch images
---
## Troubleshooting
### Format Check Fails
**Error**: `code is not properly formatted`
**Solution**:
```bash
cd backend
cargo fmt --all
git commit -am "style: fix formatting"
git push
```
### Clippy Shows Warnings
**Behavior**: Clippy runs but shows warnings
**Action**:
1. Review warnings in CI logs
2. Fix legitimate issues
3. Suppress false positives if needed
4. Warnings don't block CI (non-strict mode)
### Build Fails
**Error**: Compilation errors
**Solution**:
1. Check error messages in CI logs
2. Fix compilation errors locally
3. Run `cargo build --release` to verify
4. Commit fixes and push
---
## Infrastructure Details
### Forgejo Runner
- **Location**: Solaria (solaria.soliverez.com.ar)
- **Type**: Docker-based runner
- **Label**: `docker`
- **Docker Version**: 29.3.0
- **Network**: Creates temporary networks for each job
### Container Images
- **Rust Jobs**: `rust:latest` (Debian-based)
- **Node.js**: v20.x (installed via apt)
- **Docker**: Not used in CI (see Docker Builds section above)
### Environment Variables
- `CARGO_TERM_COLOR`: always
- Job-level isolation (no shared state between jobs)
---
## Success Metrics
### Code Quality ✅
- ✅ **Format enforcement**: 100% (strict)
- ✅ **Clippy linting**: Active (non-strict)
- ✅ **Build verification**: 100% success rate
- ✅ **PR validation**: Automated
### CI Performance ✅
- ✅ **Format check**: ~30 seconds
- ✅ **Clippy lint**: ~45 seconds
- ✅ **Build verification**: ~60 seconds
- ✅ **Total CI time**: ~2.5 minutes (parallel jobs)
### Developer Experience ✅
- ✅ **Fast feedback**: Parallel jobs
- ✅ **Clear diagnostics**: Separate jobs
- ✅ **Local testing**: Pre-commit script
- ✅ **Documentation**: Comprehensive guides
---
## Alternatives Considered
### Why Not Fix DinD?
**Attempted Solutions**:
1. Socket mount - ❌ Socket not accessible
2. DinD with TCP - ❌ DNS resolution fails
3. Buildx with DinD - ❌ Same DNS issues
4. Various service configs - ❌ All fail
**Root Cause**: Forgejo's network architecture isolates jobs in separate temporary networks.
**Cost to Fix**:
- Reconfigure Forgejo runner infrastructure
- Or use a different CI system (GitHub Actions, GitLab CI)
- Or run self-hosted runner with privileged Docker access
**Decision**: Pragmatic approach - focus on what CI does well (code quality checks) and handle Docker builds separately.
### Why Not Use GitHub Actions?
**Pros**:
- Mature DinD support
- Better Buildx integration
- Container registry included
**Cons**:
- Not self-hosted
- Data leaves infrastructure
- Monthly costs for private repos
- Migration effort
**Decision**: Keep using Forgejo (self-hosted, free), work within its limitations.
---
## Conclusion
### What We Achieved ✅
1. **Format Checking** - Strict code style enforcement
2. **PR Validation** - Automated checks on all PRs
3. **Build Verification** - Ensures code compiles
4. **Non-strict Clippy** - Shows warnings, doesn't block
5. **Fast CI** - Parallel jobs, ~2.5 minutes total
6. **Good Documentation** - Comprehensive guides
### What We Learned 📚
1. **DinD Limitations** - Doesn't work well in Forgejo's isolated networks
2. **Pragmatic Solutions** - Focus on what CI can do well
3. **Separate Concerns** - CI for code quality, deployment scripts for Docker
4. **Iteration** - Took 11 commits to find working solution
### Final State 🎯
**CI Pipeline**: Production-ready for code quality checks
**Docker Builds**: Handled separately via deployment scripts
**Status**: ✅ Fully operational and effective
---
**End of Final Solution Document**
Generated: 2026-03-18 13:30:00
Last Updated: Commit a57bfca
Forgejo URL: http://gitea.soliverez.com.ar/alvaro/normogen/actions

0
docs/deployment/DOCKER_IMPROVEMENTS_SUMMARY.md → docs/archive/DOCKER_IMPROVEMENTS_SUMMARY.md
View file

0
docs/implementation/PHASE28_COMPLETE_SPECS.md → docs/archive/PHASE28_COMPLETE_SPECS.md
View file

0
docs/implementation/PHASE28_PILL_IDENTIFICATION.md → docs/archive/PHASE28_PILL_IDENTIFICATION.md
View file

0
docs/implementation/PHASE28_PLAN.md → docs/archive/PHASE28_PLAN.md
View file

0
docs/implementation/PHASE_2.7_DEPLOYMENT_PLAN.md → docs/archive/PHASE_2.7_DEPLOYMENT_PLAN.md
View file

0
docs/implementation/PHASE_2.7_MVP_PRIORITIZED_PLAN.md → docs/archive/PHASE_2.7_MVP_PRIORITIZED_PLAN.md
View file

0
docs/implementation/PHASE_2.7_PLAN.md → docs/archive/PHASE_2.7_PLAN.md
View file

15
docs/archive/README.md Normal file
View file

@ -0,0 +1,15 @@
# Archive
Superseded and historical documentation, kept for reference but not current.
For the live, authoritative docs see the [main documentation index](../README.md).
Contents:
- **Phase plans** (`PHASE_2.7_PLAN.md`, `PHASE_2.7_MVP_PRIORITIZED_PLAN.md`,
`PHASE_2.7_DEPLOYMENT_PLAN.md`, `PHASE28_PLAN.md`, `PHASE28_COMPLETE_SPECS.md`,
`PHASE28_PILL_IDENTIFICATION.md`) — the original planning documents for phases
that are now implemented. See `../implementation/` for the completion records.
- **`API_TEST_RESULTS_SOLARIA.md`** — a point-in-time API test-run snapshot.
- **`DOCKER_IMPROVEMENTS_SUMMARY.md`** — historical Docker optimization notes.
- **`CI-CD-FINAL-SOLUTION.md`** — the CI/CD state as of 2026-03-18 (3 jobs, no
`test` job yet). For the *current* CI see `../development/CI-CD.md`.

175
docs/deployment/DEPLOY_README.md
View file

@ -1,175 +0,0 @@
# Normogen Deployment to Solaria
## Quick Start
### 1. Deploy to Solaria
```bash
./deploy-to-solaria.sh
```
This script will:
- Push latest changes to git
- Connect to Solaria via SSH
- Clone/update the repository
- Build and start Docker containers
- Show deployment status
### 2. Test All API Endpoints
```bash
./test-api-endpoints.sh
```
This will test:
- Health check
- Authentication (register, login)
- User management (profile, settings)
- Password recovery
- Share management
- Permissions
- Session management
### 3. Check Server Logs
```bash
./check-solaria-logs.sh
```
## Server Information
- **Hostname:** solaria (10.0.10.30)
- **User:** alvaro
- **Remote Directory:** /home/alvaro/normogen
- **API Port:** 8000
- **Base URL:** http://solaria:8000
## What's New in Phase 2.6
### Security Features
✅ **Session Management**
- Track sessions across devices
- Revoke specific or all sessions
- Automatic cleanup
✅ **Audit Logging**
- Log all security events
- Query by user or system-wide
- Track authentication, data access, modifications
✅ **Account Lockout**
- Brute-force protection
- Progressive lockout durations
- Automatic reset on successful login
✅ **Security Headers**
- X-Content-Type-Options: nosniff
- X-Frame-Options: DENY
- X-XSS-Protection: 1; mode=block
- Strict-Transport-Security
- Content-Security-Policy
### New API Endpoints
- `GET /api/sessions` - List all active sessions
- `DELETE /api/sessions/:id` - Revoke specific session
- `DELETE /api/sessions/all` - Revoke all sessions
## Deployment Checklist
- [x] Phase 2.6 implementation complete
- [x] Code compiles successfully
- [x] All changes committed to git
- [x] Deployment scripts created
- [x] API test scripts created
- [ ] Deploy to Solaria
- [ ] Run API tests
- [ ] Verify all endpoints working
- [ ] Check logs for errors
## Troubleshooting
### Connection Issues
```bash
# Test SSH connection
ssh alvaro@solaria
# Check if Docker is running
ssh alvaro@solaria "docker ps"
```
### Container Issues
```bash
# SSH to server
ssh alvaro@solaria
# Check containers
cd ~/normogen/backend
docker-compose ps
# View logs
docker-compose logs backend
# Restart
docker-compose restart
```
### API Not Responding
```bash
# Check if port 8000 is accessible
curl http://solaria:8000/health
# Check firewall
ssh alvaro@solaria "sudo ufw status"
```
## Files Created
1. `deploy-to-solaria.sh` - Automated deployment script
2. `test-api-endpoints.sh` - Comprehensive API testing
3. `check-solaria-logs.sh` - Server log viewer
4. `DEPLOYMENT_GUIDE.md` - Detailed deployment documentation
5. `DEPLOY_README.md` - This file
## Next Steps After Deployment
1. ✅ Verify deployment successful
2. ✅ Test all API endpoints
3. ✅ Check for any errors in logs
4. ⏳ Integrate session management into auth flow
5. ⏳ Implement proper rate limiting
6. ⏳ Add comprehensive tests
7. ⏳ Begin Phase 2.7
## Architecture
```
┌─────────────────────────────────────┐
│ Solaria Server │
│ ┌──────────────────────────────┐ │
│ │ Docker Compose │ │
│ │ ┌────────────────────────┐ │ │
│ │ │ Backend Container │ │ │
│ │ │ - Rust/Axum API │ │ │
│ │ │ - Port 8000 │ │ │
│ │ └────────────────────────┘ │ │
│ │ ┌────────────────────────┐ │ │
│ │ │ MongoDB Container │ │ │
│ │ │ - Port 27017 │ │ │
│ │ └────────────────────────┘ │ │
│ └──────────────────────────────┘ │
└─────────────────────────────────────┘
↑
│ SSH + Git
│
┌────────┴────────┐
│ Local Machine │
│ - Development │
│ - Git Push │
└─────────────────┘
```
## Support
For detailed information:
- See `DEPLOYMENT_GUIDE.md` for comprehensive docs
- See `PHASE_2.6_COMPLETION.md` for implementation details
- See `STATUS.md` for overall project status
Ready to deploy? Run: `./deploy-to-solaria.sh`

512
docs/deployment/DOCKER_DEPLOYMENT_IMPROVEMENTS.md
View file

@ -1,512 +0,0 @@
# 🐳 Docker Deployment Improvements for Normogen Backend
## Executive Summary
I've created **production-ready Docker configurations** that fix all current deployment issues. The new setup includes health checks, security hardening, resource limits, and automated deployment.
---
## 🔴 Critical Issues Found in Current Setup
### 1. **Binary Path Problem** ⚠️ CRITICAL
- **Current:** `CMD ["./normogen-backend"]` in Dockerfile
- **Issue:** Incorrect binary path relative to WORKDIR
- **Impact:** Container fails to start with "executable not found"
- **Fix:** Changed to `ENTRYPOINT ["/app/normogen-backend"]`
### 2. **No Health Checks** ⚠️ CRITICAL
- **Current:** No HEALTHCHECK directive or docker-compose health checks
- **Issue:** Failing containers aren't detected automatically
- **Impact:** Silent failures, no automatic recovery
- **Fix:** Added health checks every 30s to both services
### 3. **Missing Startup Dependencies** ⚠️ CRITICAL
- **Current:** Backend starts immediately without waiting for MongoDB
- **Issue:** Connection failures on startup
- **Impact:** Unreliable application startup
- **Fix:** Added `condition: service_healthy` dependency
### 4. **Running as Root** ⚠️ SECURITY VULNERABILITY
- **Current:** Container runs as root user
- **Issue:** Security vulnerability, violates best practices
- **Impact:** Container breakout risks
- **Fix:** Created non-root user "normogen" (UID 1000)
### 5. **No Resource Limits** ⚠️ OPERATIONS RISK
- **Current:** Unlimited CPU/memory usage
- **Issue:** Containers can consume all system resources
- **Impact:** Server crashes, resource exhaustion
- **Fix:** Added limits (1 CPU core, 512MB RAM)
### 6. **Poor Layer Caching** ⚠️ PERFORMANCE
- **Current:** Copies all source code before building
- **Issue:** Every change forces full rebuild
- **Impact:** 10+ minute build times
- **Fix:** Optimized layer caching (3x faster builds)
### 7. **Large Image Size** ⚠️ PERFORMANCE
- **Current:** Single-stage build includes build tools
- **Issue:** Image size ~1.5GB
- **Impact:** Slow pulls, wasted storage
- **Fix:** Multi-stage build (~400MB final image)
### 8. **Port Conflict** ✅ ALREADY FIXED
- **Current:** Port 8000 used by Portainer
- **Fix:** Changed to port 8001 (you already did this!)
### 9. **Duplicate Service Definitions** ⚠️ CONFIG ERROR
- **Current:** docker-compose.yml has duplicate service definitions
- **Issue:** Confusing and error-prone
- **Fix:** Clean, single definition per service
---
## ✅ Solutions Created
### New Files
#### 1. **backend/docker/Dockerfile.improved** ✨
Multi-stage build with:
- **Build stage:** Caches dependencies separately
- **Runtime stage:** Minimal Debian image
- **Non-root user:** normogen (UID 1000)
- **Health checks:** Every 30s with curl
- **Correct path:** `/app/normogen-backend`
- **Proper permissions:** Executable binary
- **Signal handling:** Proper ENTRYPOINT
#### 2. **backend/docker/docker-compose.improved.yml** ✨
Production-ready compose with:
- **Health checks:** Both MongoDB and backend
- **Dependency management:** Waits for MongoDB healthy
- **Resource limits:** 1 CPU core, 512MB RAM
- **Environment variables:** Proper variable expansion
- **Clean definitions:** No duplicates
- **Restart policy:** unless-stopped
- **Network isolation:** Dedicated bridge network
- **Volume management:** Named volumes for persistence
#### 3. **backend/deploy-to-solaria-improved.sh** ✨
Automated deployment script:
- **Local build:** Faster than building on server
- **Step-by-step:** Clear progress messages
- **Error handling:** `set -e` for fail-fast
- **Health verification:** Tests API after deployment
- **Color output:** Easy-to-read status messages
- **Rollback support:** Can stop old containers first
#### 4. **DOCKER_DEPLOYMENT_IMPROVEMENTS.md** ✨
This comprehensive guide!
---
## 📊 Before & After Comparison
### Dockerfile Comparison
```diff
# BEFORE (Single-stage, runs as root, wrong path)
FROM rust:1.93-slim
WORKDIR /app
COPY . .
RUN cargo build --release
- CMD ["./normogen-backend"] # ❌ Wrong path, relative
+ # No health check
+ # No user management
+ # Includes build tools (1.5GB image)
# AFTER (Multi-stage, non-root, correct path)
# Build stage
FROM rust:1.93-slim AS builder
WORKDIR /app
+ COPY Cargo.toml Cargo.lock ./ # Cache dependencies first
+ RUN mkdir src && echo "fn main() {}" > src/main.rs \
+ && cargo build --release && rm -rf src
COPY src ./src
RUN cargo build --release
# Runtime stage
FROM debian:bookworm-slim
+ RUN useradd -m -u 1000 normogen
WORKDIR /app
COPY --from=builder /app/target/release/normogen-backend /app/
+ RUN chown normogen:normogen /app/normogen-backend
+ USER normogen
+ HEALTHCHECK --interval=30s CMD curl -f http://localhost:8000/health || exit 1
+ ENTRYPOINT ["/app/normogen-backend"] # ✅ Correct absolute path
+ # Minimal image (~400MB)
```
### docker-compose Comparison
```diff
services:
backend:
- image: normogen-backend:runtime
+ build:
+ dockerfile: docker/Dockerfile.improved
ports:
- "8001:8000"
environment:
- JWT_SECRET: example_key_not_for_production # ❌ Hardcoded
+ JWT_SECRET: ${JWT_SECRET} # ✅ From environment
depends_on:
- - mongodb # ❌ No health check, starts immediately
+ mongodb:
+ condition: service_healthy # ✅ Waits for MongoDB healthy
+ healthcheck: # ✅ New
+ test: ["CMD", "curl", "-f", "http://localhost:8000/health"]
+ interval: 30s
+ timeout: 10s
+ retries: 3
+ start_period: 10s
+ deploy: # ✅ New resource limits
+ resources:
+ limits:
+ cpus: '1.0'
+ memory: 512M
+ reservations:
+ cpus: '0.25'
+ memory: 128M
```
---
## 🚀 How to Deploy
### Option 1: Automated (Recommended) ⭐
```bash
# 1. Set your JWT secret (generate one securely)
export JWT_SECRET=$(openssl rand -base64 32)
# 2. Run the improved deployment script
./backend/deploy-to-solaria-improved.sh
```
That's it! The script will:
- Build the binary locally
- Create the directory structure on Solaria
- Set up environment variables
- Copy Docker files
- Stop old containers
- Start new containers
- Verify the deployment
### Option 2: Manual Step-by-Step
```bash
# 1. Build the binary locally (much faster than on server)
cd ~/normogen/backend
cargo build --release
# 2. Create directory structure on Solaria
ssh solaria 'mkdir -p /srv/normogen/docker'
# 3. Create .env file on Solaria
ssh solaria 'cat > /srv/normogen/.env << EOF
MONGODB_DATABASE=normogen
JWT_SECRET=your-super-secret-key-at-least-32-characters-long
RUST_LOG=info
SERVER_PORT=8000
SERVER_HOST=0.0.0.0
EOF'
# 4. Copy improved Docker files to Solaria
scp docker/Dockerfile.improved solaria:/srv/normogen/docker/
scp docker/docker-compose.improved.yml solaria:/srv/normogen/docker/
# 5. Stop old containers (if running)
ssh solaria 'cd /srv/normogen && docker compose down 2>/dev/null || true'
# 6. Start with new improved configuration
ssh solaria 'cd /srv/normogen && docker compose -f docker/docker-compose.improved.yml up -d'
# 7. Check container status
ssh solaria 'docker compose -f /srv/normogen/docker/docker-compose.improved.yml ps'
```
---
## 🧪 Verification Steps
After deployment, verify everything is working:
```bash
# 1. Check container is running
ssh solaria 'docker ps | grep normogen'
# Expected output:
# CONTAINER ID IMAGE STATUS
# abc123 normogen-backend:latest Up 2 minutes (healthy)
# def456 mongo:6.0 Up 2 minutes (healthy)
# 2. Check health status
ssh solaria 'docker inspect --format="{{.State.Health.Status}}" normogen-backend'
# Expected output: healthy
# 3. View recent logs
ssh solaria 'docker logs --tail 50 normogen-backend'
# 4. Test API health endpoint
curl http://solaria.solivarez.com.ar:8001/health
# Expected output: {"status":"ok"}
# 5. Test API readiness endpoint
curl http://solaria.solivarez.com.ar:8001/ready
# Expected output: {"status":"ready"}
# 6. Check resource usage
ssh solaria 'docker stats normogen-backend normogen-mongodb --no-stream'
# Expected: Memory < 512MB, CPU usage reasonable
```
---
## 📈 Benefits & Improvements
### 🚀 Performance
| Metric | Before | After | Improvement |
|--------|--------|-------|-------------|
| **Build time** | ~10 min | ~3 min | **3x faster** |
| **Image size** | ~1.5 GB | ~400 MB | **4x smaller** |
| **Startup time** | Unreliable | Consistent | **100% reliable** |
| **Memory usage** | Unlimited | Max 512MB | **Controlled** |
### 🛡️ Reliability
- ✅ **Health checks** detect failures automatically every 30s
- ✅ **Proper dependencies** - backend waits for MongoDB
- ✅ **Automatic restart** on failure (unless-stopped policy)
- ✅ **Consistent startup** - no more connection race conditions
### 🔒 Security
- ✅ **Non-root user** - runs as normogen (UID 1000)
- ✅ **Minimal image** - no build tools in production
- ✅ **Reduced attack surface** - only runtime dependencies
- ✅ **Proper permissions** - binary owned by non-root user
### 👮 Operations
- ✅ **Automated deployment** - one-command deployment
- ✅ **Better logging** - easier debugging
- ✅ **Resource limits** - prevents resource exhaustion
- ✅ **Clear process** - documented procedures
- ✅ **Easy rollback** - simple to revert if needed
---
## 🔍 Troubleshooting
### Container keeps restarting
```bash
# Check detailed error logs
ssh solaria 'docker logs normogen-backend'
# Check the exit code
ssh solaria 'docker inspect normogen-backend | grep ExitCode'
# Check health check output
ssh solaria 'docker inspect --format="{{range .State.Health.Log}}{{.Output}}\n{{end}}" normogen-backend'
# Check if it's a database connection issue
ssh solaria 'docker logs normogen-backend | grep -i mongo'
```
**Common causes:**
- JWT_SECRET not set or too short
- MongoDB not ready yet
- Port conflicts
### Port conflicts
```bash
# Check what's using port 8001
ssh solaria 'netstat -tlnp | grep 8001'
# Or using ss (more modern)
ssh solaria 'ss -tlnp | grep 8001'
# Check Docker containers using the port
ssh solaria 'docker ps | grep 8001'
```
**Solution:** Stop the conflicting container or use a different port
### Database connection issues
```bash
# Verify MongoDB is healthy
ssh solaria 'docker exec normogen-mongodb mongosh --eval "db.adminCommand('ping')"'
# Expected output: { ok: 1 }
# Check if backend can reach MongoDB
ssh solaria 'docker exec normogen-backend ping -c 2 mongodb'
# Expected: 2 packets transmitted, 2 received
# Check backend logs for MongoDB errors
ssh solaria 'docker logs normogen-backend | grep -i mongodb'
```
**Common causes:**
- MongoDB not started yet
- Network issue between containers
- Wrong MongoDB URI
### Resource issues
```bash
# Check real-time resource usage
ssh solaria 'docker stats normogen-backend normogen-mongodb'
# Check disk usage
ssh solaria 'docker system df'
# Check container size
ssh solaria 'docker images | grep normogen'
```
**If resource limits are hit:**
- Increase memory limit in docker-compose.improved.yml
- Check for memory leaks in application
- Add more RAM to the server
### Deployment failures
```bash
# Check if files were copied correctly
ssh solaria 'ls -la /srv/normogen/docker/'
# Check if .env file exists
ssh solaria 'cat /srv/normogen/.env'
# Try manual deployment (see Option 2 above)
ssh solaria 'cd /srv/normogen && docker compose -f docker/docker-compose.improved.yml up -d'
```
---
## 📞 Quick Reference Commands
```bash
# ===== Deployment =====
# Deploy (automated)
JWT_SECRET=your-secret ./backend/deploy-to-solaria-improved.sh
# Generate secure JWT secret
openssl rand -base64 32
# ===== Monitoring =====
# View all container logs
ssh solaria 'docker compose -f /srv/normogen/docker/docker-compose.improved.yml logs -f'
# View backend logs only
ssh solaria 'docker logs -f normogen-backend'
# View MongoDB logs
ssh solaria 'docker logs -f normogen-mongodb'
# Check container status
ssh solaria 'docker compose -f /srv/normogen/docker/docker-compose.improved.yml ps'
# Check health status
ssh solaria 'docker inspect --format="{{.State.Health.Status}}" normogen-backend'
# Check resource usage
ssh solaria 'docker stats normogen-backend normogen-mongodb'
# ===== Control =====
# Restart services
ssh solaria 'docker compose -f /srv/normogen/docker/docker-compose.improved.yml restart'
# Restart backend only
ssh solaria 'docker restart normogen-backend'
# Stop services
ssh solaria 'docker compose -f /srv/normogen/docker/docker-compose.improved.yml down'
# Start services
ssh solaria 'docker compose -f /srv/normogen/docker/docker-compose.improved.yml up -d'
# ===== Updates =====
# Pull latest code and rebuild
ssh solaria 'cd /srv/normogen && docker compose -f docker/docker-compose.improved.yml up -d --build'
# View image sizes
ssh solaria 'docker images | grep normogen'
# Clean up old images
ssh solaria 'docker image prune -f'
```
---
## 🎯 What's Fixed Summary
| # | Issue | Severity | Status |
|---|-------|----------|--------|
| 1 | Binary path incorrect | 🔴 Critical | ✅ Fixed |
| 2 | No health checks | 🔴 Critical | ✅ Fixed |
| 3 | No startup dependencies | 🔴 Critical | ✅ Fixed |
| 4 | Running as root | 🔴 Security | ✅ Fixed |
| 5 | No resource limits | 🟡 Medium | ✅ Fixed |
| 6 | Poor layer caching | 🟡 Performance | ✅ Fixed |
| 7 | Large image size | 🟡 Performance | ✅ Fixed |
| 8 | Port 8000 conflict | ✅ Fixed | ✅ Fixed |
| 9 | Duplicate definitions | 🟡 Config | ✅ Fixed |
---
## 📋 Next Steps
### Immediate (Do Now)
1. ✅ Review the improved Docker files
2. ⏳ Set JWT_SECRET environment variable
3. ⏳ Deploy using the improved script
4. ⏳ Monitor health checks
5. ⏳ Test all API endpoints
### Short-term (This Week)
6. ⏳ Add application metrics (Prometheus)
7. ⏳ Set up automated MongoDB backups
8. ⏳ Add log aggregation (Loki/ELK)
9. ⏳ Consider secrets management (HashiCorp Vault)
### Long-term (This Month)
10. ⏳ CI/CD pipeline integration
11. ⏳ Multi-environment setup (dev/staging/prod)
12. ⏳ Blue-green deployment strategy
13. ⏳ Performance monitoring (Grafana)
---
## ✨ Summary
The improved Docker setup addresses **ALL current issues**:
✅ **Fixed binary path** - correct absolute path
✅ **Added health checks** - automatic failure detection
✅ **Non-root execution** - production security
✅ **Resource limits** - prevents exhaustion
✅ **Faster builds** - 3x improvement
✅ **Smaller image** - 4x reduction
✅ **Automated deployment** - one command
✅ **Better security** - minimal attack surface
**Status:** 🟢 Ready to deploy!
**Risk:** 🟢 Low (easy rollback)
**Time:** 🟢 5-10 minutes
**Impact:** 🟢 Eliminates all repeated failures
The new setup is **production-ready** and follows Docker best practices. It will completely eliminate the deployment failures you've been experiencing.
---
**Need help?** Check the troubleshooting section above or review the logs.
**Ready to deploy?** Run: `JWT_SECRET=$(openssl rand -base64 32) ./backend/deploy-to-solaria-improved.sh`

62
docs/deployment/QUICK_DEPLOYMENT_REFERENCE.md
View file

@ -1,62 +0,0 @@
# 🚀 Quick Deployment Reference
## Deploy to Solaria (Improved)
### One-Command Deployment
```bash
# Set JWT secret and deploy
JWT_SECRET=$(openssl rand -base64 32) ./backend/deploy-to-solaria-improved.sh
```
### What's Fixed
| Issue | Before | After |
|-------|--------|-------|
| Binary path | `./normogen-backend` (wrong) | `/app/normogen-backend` (correct) |
| Health checks | None | Every 30s |
| User | root | normogen (UID 1000) |
| Image size | ~1.5GB | ~400MB |
| Build time | ~10 min | ~3 min |
| Dependencies | None | Waits for MongoDB |
| Resources | Unlimited | 1 CPU, 512MB RAM |
### Files Created
1. **backend/docker/Dockerfile.improved** - Multi-stage build
2. **backend/docker/docker-compose.improved.yml** - Production-ready compose
3. **backend/deploy-to-solaria-improved.sh** - Automated deployment
4. **DOCKER_DEPLOYMENT_IMPROVEMENTS.md** - Complete guide
### Quick Commands
```bash
# View logs
ssh solaria 'docker logs -f normogen-backend'
# Check status
ssh solaria 'docker ps | grep normogen'
# Restart services
ssh solaria 'docker compose -f /srv/normogen/docker/docker-compose.improved.yml restart'
# Test API
curl http://solaria.solivarez.com.ar:8001/health
```
### Troubleshooting
```bash
# Container not starting?
ssh solaria 'docker logs normogen-backend'
# Port conflict?
ssh solaria 'netstat -tlnp | grep 8001'
# MongoDB issues?
ssh solaria 'docker exec normogen-mongodb mongosh --eval "db.adminCommand('ping')"'
```
---
**Ready?** Run: `JWT_SECRET=$(openssl rand -base64 32) ./backend/deploy-to-solaria-improved.sh`

1
docs/deployment/deploy-to-solaria-manual.sh
View file

@ -1 +0,0 @@
${deployScript}

56
docs/development/CI-CD.md Normal file
View file

@ -0,0 +1,56 @@
# CI/CD Pipeline
The CI pipeline runs on **Forgejo Actions** and is defined in
[`.forgejo/workflows/lint-and-build.yml`](../../.forgejo/workflows/lint-and-build.yml).
**Triggers**: push and pull request to `main` and `develop`.
## Jobs
Four jobs, each running in a `rust:latest` container on the `docker` runner:
| Job | Depends on | Command | Purpose |
|-----|-----------|---------|---------|
| `format` | — | `cargo fmt --all -- --check` | Strict formatting check (must pass) |
| `clippy` | — | `cargo clippy --all-targets --all-features` | Lint (non-strict — warnings shown, don't fail) |
| `build` | `format`, `clippy` | `cargo build --release` | Release build |
| `test` | `format`, `clippy` | `cargo test --all-targets` | Unit + integration tests |
`format` and `clippy` run in parallel; `build` and `test` run after both pass.
### The `test` job
Integration tests need a live MongoDB, so the `test` job provisions a
`mongo:7` **service container** and sets `MONGODB_URI=mongodb://mongo:27017`.
The tests target an isolated per-run database and skip gracefully if Mongo is
unreachable, so the job stays green even on runners that can't provide service
containers.
## Docker builds are NOT in CI
There is deliberately **no `docker-build` job**. The Forgejo `act` runner creates
isolated networks per job, which breaks every Docker-in-CI approach tried
(socket mount, DinD, Buildx, direct host access). Docker images are built
separately:
- **Locally**: `docker build -f backend/docker/Dockerfile backend/`
- **On Solaria**: see [../deployment/](../deployment/DEPLOYMENT_GUIDE.md)
## Running CI checks locally
Use [`scripts/test-ci-locally.sh`](../../scripts/test-ci-locally.sh), which runs
the same format/clippy/build/test sequence. For the integration tests it needs a
reachable MongoDB:
```bash
docker run -d -p 27017:27017 --name mongo-test mongo:7
./scripts/test-ci-locally.sh
```
## Dashboard
CI runs: `http://gitea.solivarez.com.ar/alvaro/normogen/actions`
---
*Last Updated: 2026-06-27*

428
docs/development/CI-IMPROVEMENTS.md
View file

@ -1,428 +0,0 @@
# CI/CD Improvements - Format Check, PR Validation, and Docker Buildx
**Date**: 2026-03-17
**Status**: ✅ Implemented
**Author**: AI Agent
---
## Summary
Enhanced the Forgejo CI/CD pipeline with three major improvements:
1. **Format checking** - Enforces consistent code style
2. **PR validation** - Automated checks for pull requests
3. **Docker Buildx** - Multi-platform Docker builds with caching
---
## Changes Made
### 1. Pull Request Validation
**Before**:
```yaml
on:
push:
branches: [main]
```
**After**:
```yaml
on:
push:
branches: [main, develop]
pull_request:
branches: [main, develop]
```
**Benefits**:
- ✅ Validates code before merging to main
- ✅ Catches issues early in development cycle
- ✅ Supports `develop` branch workflow
- ✅ Provides automated feedback on PRs
---
### 2. Code Format Checking
**New Job**: `format`
```yaml
format:
name: Check Code Formatting
runs-on: docker
container:
image: rust:1.83-slim
steps:
- name: Checkout code
uses: actions/checkout@v4
- name: Check formatting
working-directory: ./backend
run: cargo fmt --all -- --check
```
**Behavior**:
- Runs `rustfmt` in check mode
- Fails if code is not properly formatted
- Runs in parallel with Clippy (faster feedback)
- Uses strict formatting rules from `backend/rustfmt.toml`
**How to Fix Format Issues**:
```bash
cd backend
cargo fmt --all # Auto-format all code
git commit -am "style: auto-format code with rustfmt"
```
---
### 3. Job Parallelization
**Before**: Single monolithic job (sequential)
**After**: Multiple parallel jobs
```
┌─────────────┐ ┌─────────────┐
│ Format │ │ Clippy │ ← Run in parallel
└──────┬──────┘ └──────┬──────┘
│ │
└────────┬───────┘
▼
┌─────────────┐
│ Build │ ← Depends on format + clippy
└──────┬──────┘
▼
┌─────────────┐
│ Docker Build│ ← Depends on build
└─────────────┘
```
**Benefits**:
- ⚡ Faster feedback (format + clippy run simultaneously)
- 🎯 Clearer failure messages (separate jobs)
- 📊 Better resource utilization
- 🔄 Can run format/clippy without building
---
### 4. Docker Buildx Integration
**New Job**: `docker-build`
**Configuration**:
- Uses `docker:cli` container
- DinD service for isolated builds
- Buildx for advanced features
- Local caching for faster builds
**Features**:
```yaml
services:
docker:
image: docker:dind
command: ["dockerd", "--host=tcp://0.0.0.0:2375", "--tls=false"]
options: >-
--privileged
-e DOCKER_TLS_CERTDIR=
```
**Buildx Commands**:
```bash
# Create builder with host networking
docker buildx create --use --name builder --driver docker --driver-opt network=host
# Build with caching
docker buildx build \
--tag normogen-backend:${{ github.sha }} \
--tag normogen-backend:latest \
--cache-from type=local,src=/tmp/.buildx-cache \
--cache-to type=local,dest=/tmp/.buildx-cache-new,mode=max \
--load \
.
```
**Benefits**:
- 🏗️ Multi-platform build support (can build for ARM, etc.)
- 💾 Smart caching (faster subsequent builds)
- 🔒 Isolated builds (DinD)
- 🐳 Production-ready images
- 📦 Versioned images (Git SHA tags)
---
## Workflow Structure
### Job Dependencies
```yaml
format: # No dependencies
clippy: # No dependencies
build: # needs: [format, clippy]
docker: # needs: [build]
summary: # needs: [format, clippy, build, docker]
```
### Execution Flow
1. **Parallel Stage** (Fast feedback)
- Format check (~10s)
- Clippy lint (~30s)
2. **Build Stage** (If quality checks pass)
- Build release binary (~60s)
3. **Docker Stage** (If build succeeds)
- Build Docker image with Buildx (~40s)
4. **Summary Stage** (Always runs)
- Report overall status
- Fail if any job failed
---
## CI Environment
### Runner Details
- **Location**: Solaria server
- **Type**: Docker-based runner
- **Label**: `docker`
- **Docker Version**: 29.0.0
- **Buildx Version**: v0.29.1
### Docker-in-Docker Setup
- **Service**: `docker:dind`
- **Socket**: TCP endpoint (not Unix socket)
- **Privileged Mode**: Enabled
- **TLS**: Disabled for local communication
### Why TCP Socket?
Previous attempts used Unix socket mounting:
```yaml
volumes:
- /var/run/docker.sock:/var/run/docker.sock
```
This approach has issues:
- ⚠️ Security concerns (host Docker access)
- ⚠️ Permission issues
- ⚠️ Not portable
Current approach uses TCP:
```yaml
services:
docker:
image: docker:dind
command: ["dockerd", "--host=tcp://0.0.0.0:2375", "--tls=false"]
```
Benefits:
- ✅ Isolated Docker daemon
- ✅ No permission issues
- ✅ Better security
- ✅ Portable across runners
---
## Artifacts
### Binary Upload
```yaml
- name: Upload binary artifact
uses: actions/upload-artifact@v4
with:
name: normogen-backend
path: backend/target/release/normogen-backend
```
### Docker Images
Built images are tagged:
- `normogen-backend:latest` - Latest build
- `normogen-backend:{sha}` - Versioned by commit SHA
**Note**: Pushing to registry is commented out (requires secrets)
---
## Usage
### For Developers
**Before Pushing**:
```bash
# Check formatting locally
cd backend
cargo fmt --all -- --check
# Run clippy locally
cargo clippy --all-targets --all-features -- -D warnings
# Build to ensure it compiles
cargo build --release
```
**If Format Check Fails**:
```bash
# Auto-fix formatting
cargo fmt --all
# Commit the changes
git add .
git commit -m "style: auto-format code"
git push
```
**Triggering CI**:
- Push to `main` or `develop`
- Open/Update a PR to `main` or `develop`
### For PR Review
CI will automatically check:
- ✅ Code is properly formatted
- ✅ No Clippy warnings
- ✅ Builds successfully
- ✅ Docker image builds
**All checks must pass before merging!**
---
## Troubleshooting
### Format Check Fails
**Error**: `code is not properly formatted`
**Solution**:
```bash
cd backend
cargo fmt --all
git commit -am "style: fix formatting"
```
### Clippy Fails
**Error**: `warning: unused variable` etc.
**Solution**:
1. Fix warnings locally
2. Run `cargo clippy --all-targets --all-features -- -D warnings`
3. Commit fixes
### Docker Build Fails
**Error**: `Cannot connect to Docker daemon`
**Check**:
- DinD service is running
- TCP endpoint is accessible
- No firewall issues
**Solution**: The workflow uses privileged mode and proper networking - if it fails, check runner configuration.
### Build Cache Issues
**Error**: Cache growing too large
**Solution**: The workflow uses a cache rotation strategy:
```bash
# Build with new cache
--cache-to type=local,dest=/tmp/.buildx-cache-new,mode=max
# Move new cache (removes old)
mv /tmp/.buildx-cache-new /tmp/.buildx-cache
```
---
## Future Enhancements
### Ready to Enable (Commented Out)
**1. Docker Registry Push**
```yaml
- name: Push Docker image
if: github.ref == 'refs/heads/main'
run: |
docker push normogen-backend:${{ github.sha }}
docker push normogen-backend:latest
```
**Requires**:
- Set up container registry
- Configure secrets: `REGISTRY_USER`, `REGISTRY_PASSWORD`
**2. Integration Tests**
```yaml
test:
services:
mongodb:
image: mongo:7
steps:
- name: Run tests
run: cargo test --verbose
```
**3. Security Scanning**
```yaml
security:
steps:
- name: Run cargo audit
run: cargo audit
```
### Planned Enhancements
- [ ] Add MongoDB for integration tests
- [ ] Add code coverage reporting (tarpaulin)
- [ ] Add security audit (cargo-audit)
- [ ] Add deployment automation to Solaria
- [ ] Add staging environment deployment
- [ ] Add performance benchmarking
---
## Monitoring
### View Workflow Results
1. Go to: http://gitea.soliverez.com.ar/alvaro/normogen/actions
2. Click on the latest workflow run
3. View individual job results:
- Format check
- Clippy lint
- Build
- Docker build
- Summary
### Job Status Badges
Add to README.md (when Forgejo supports badges):
```markdown
![CI Status](http://gitea.solivarez.com.ar/alvaro/normogen/badges/main/workflow/lint-and-build.yml/badge.svg)
```
---
## Related Documentation
- [Forgejo CI/CD Pipeline](./FORGEJO-CI-CD-PIPELINE.md)
- [Forgejo Runner Update](./FORGEJO-RUNNER-UPDATE.md)
- [Deployment Guide](../deployment/README.md)
- [Backend Build Status](../../backend/BUILD-STATUS.md)
---
## Summary
✅ **Format checking** - Ensures consistent code style
✅ **PR validation** - Automated checks for pull requests
✅ **Docker Buildx** - Advanced Docker builds with caching
✅ **Parallel jobs** - Faster feedback
✅ **Better diagnostics** - Separate jobs for each concern
✅ **Production-ready** - Builds and tests Docker images
**Status**: Ready to deploy! 🚀

94
docs/development/CI-QUICK-REFERENCE.md
View file

@ -1,94 +0,0 @@
# CI/CD Quick Reference
Fast reference for the Forgejo CI/CD pipeline.
---
## Trigger CI
```bash
# Push to main or develop
git push origin main
git push origin develop
# Create/update pull request
# Automatically triggers CI
```
---
## Local Pre-Commit Check
```bash
# Run all CI checks locally
./scripts/test-ci-locally.sh
# Individual checks
cd backend
cargo fmt --all -- --check # Format check
cargo clippy --all-targets --all-features -- -D warnings # Lint
cargo build --release # Build
```
---
## Fix Common Issues
### Format Fail
```bash
cd backend
cargo fmt --all
git commit -am "style: auto-format"
```
### Clippy Fail
```bash
cd backend
cargo clippy --all-targets --all-features -- -D warnings
# Fix issues, then commit
```
---
## CI Jobs
| Job | Time | Purpose |
|-----|------|---------|
| format | ~10s | Check code formatting |
| clippy | ~30s | Run linter |
| build | ~60s | Build binary |
| docker-build | ~40s | Build Docker image |
**Total**: ~2.5 min (parallel execution)
---
## Monitor CI
URL: http://gitea.soliverez.com.ar/alvaro/normogen/actions
---
## Docker Build Details
- **Builder**: Docker Buildx v0.29.1
- **Service**: DinD (docker:dind)
- **Socket**: TCP (localhost:2375)
- **Cache**: BuildKit local cache
- **Images**:
- `normogen-backend:latest`
- `normogen-backend:{sha}`
---
## Workflow File
`.forgejo/workflows/lint-and-build.yml`
---
## Documentation
- [Full Documentation](./CI-IMPROVEMENTS.md)
- [Implementation Summary](../CI-CD-IMPLEMENTATION-SUMMARY.md)
- [Original Pipeline](./FORGEJO-CI-CD-PIPELINE.md)

4
docs/development/COMMIT-NOW.sh
View file

@ -1,4 +0,0 @@
#!/bin/bash
git add -A
git commit -m 'feat(backend): Phase 2.5 permission and share models'
git push origin main

73
docs/development/FORGEJO-CI-CD-PIPELINE.md
View file

@ -1,73 +0,0 @@
# Forgejo CI/CD Pipeline
## Status: ✅ Implemented
**Date**: 2026-02-15 19:55:00 UTC
---
## Pipeline Stages
### 1. Lint Job
- Check code formatting with rustfmt
- Run clippy linter with strict rules
### 2. Build Job
- Build all targets with cargo
- Run all tests
### 3. Docker Build Job
- Build production Docker image
- Build development Docker image
---
## Trigger Events
- Push to main branch
- Push to develop branch
- Pull requests to main/develop
---
## Configuration Files
- .forgejo/workflows/lint-and-build.yml
- backend/clippy.toml
- backend/rustfmt.toml
---
## Running Locally
### Check formatting
```bash
cd backend
cargo fmt --all -- --check
cargo fmt --all # to fix
```
### Run clippy
```bash
cd backend
cargo clippy --all-targets --all-features -- -D warnings
```
### Build
```bash
cd backend
cargo build --verbose
```
### Run tests
```bash
cd backend
cargo test --verbose
```
---
## Viewing Results
After pushing, go to:
http://gitea.soliverez.com.ar/alvaro/normogen/actions

80
docs/development/FORGEJO-RUNNER-UPDATE.md
View file

@ -1,80 +0,0 @@
# Forgejo CI/CD Runner Update
**Date**: 2026-02-15 20:41:00 UTC
**Change**: Use Docker-labeled runner for all jobs
---
## What Changed
Updated all jobs in the CI/CD pipeline to use the Docker-labeled runner instead of the default ubuntu-latest runner.
**Before**:
```yaml
jobs:
lint:
runs-on: ubuntu-latest
```
**After**:
```yaml
jobs:
lint:
runs-on: docker
```
---
## Why Use the Docker Runner?
### **Benefits**
- ✅ Native Docker support
- ✅ Faster builds (Docker already available)
- ✅ Better performance on your infrastructure
- ✅ Consistent with your server setup
- ✅ Can build Docker images directly
### **Runner Details**
- **Label**: `docker`
- **Platform**: Docker-based
- **Available**: Yes (configured on your server)
---
## Affected Jobs
All three jobs now use the Docker runner:
1. **lint** - `runs-on: docker`
2. **build** - `runs-on: docker`
3. **docker-build** - `runs-on: docker`
---
## Verification
After pushing this change:
1. Go to: http://gitea.soliverez.com.ar/alvaro/normogen/actions
2. Click on the latest workflow run
3. Verify all jobs use the Docker runner
4. Check that jobs complete successfully
---
## Troubleshooting
### If jobs fail with "runner not found":
1. Check runner status in Forgejo admin panel
2. Verify the docker label is configured
3. Check runner is online and unpaused
### If Docker builds fail:
1. Verify Docker is installed on the runner
2. Check runner has sufficient disk space
3. Verify runner can access Docker registry
---
**File Modified**: `.forgejo/workflows/lint-and-build.yml`
**Status**: ✅ Updated & Ready to Push

1
docs/development/GIT-COMMAND.txt
View file

@ -1 +0,0 @@
git add -A && git commit -m 'feat(backend): Phase 2.5 permission and share models' && git push origin main

11
docs/development/GIT-LOG.md
View file

@ -1,11 +0,0 @@
eb0e2cc feat(backend): Phase 2.5 permission and share models
3eeef6d docs: Mark Phase 2.4 as COMPLETE
a3c6a43 feat(backend): Complete Phase 2.4 - User Management Enhancement
88c9319 docs: Confirm Phase 2.3 completion
04f19e8 fix(ci): Use Docker-labeled runner for all CI/CD jobs
eb0e2cc feat(backend): Phase 2.5 permission and share models
3eeef6d docs: Mark Phase 2.4 as COMPLETE
a3c6a43 feat(backend): Complete Phase 2.4 - User Management Enhancement
88c9319 docs: Confirm Phase 2.3 completion
04f19e8 fix(ci): Use Docker-labeled runner for all CI/CD jobs

55
docs/development/GIT-STATUS.md
View file

@ -1,55 +0,0 @@
# Git Status
## Status
M backend/test-password-recovery.sh
?? COMMIT-INSTRUCTIONS.txt
?? COMMIT-NOW.sh
?? GIT-COMMAND.txt
?? GIT-LOG.md
?? GIT-STATUS.md
?? GIT-STATUS.txt
?? PHASE-2-5-GIT-STATUS.md
?? backend/API-TEST-RESULTS.md
?? backend/ERROR-ANALYSIS.md
?? backend/PASSWORD-RECOVERY-TEST-RESULTS.md
?? backend/PHASE-2-5-CREATED.txt
?? backend/PHASE-2.4-SPEC.md
?? backend/quick-test.sh
?? backend/tmp/
M backend/test-password-recovery.sh
?? COMMIT-INSTRUCTIONS.txt
?? COMMIT-NOW.sh
?? GIT-COMMAND.txt
?? GIT-LOG.md
?? GIT-STATUS.md
?? GIT-STATUS.txt
?? PHASE-2-5-GIT-STATUS.md
?? backend/API-TEST-RESULTS.md
?? backend/ERROR-ANALYSIS.md
?? backend/PASSWORD-RECOVERY-TEST-RESULTS.md
?? backend/PHASE-2-5-CREATED.txt
?? backend/PHASE-2.4-SPEC.md
?? backend/quick-test.sh
?? backend/tmp/
## Recent Commits
eb0e2cc feat(backend): Phase 2.5 permission and share models
3eeef6d docs: Mark Phase 2.4 as COMPLETE
a3c6a43 feat(backend): Complete Phase 2.4 - User Management Enhancement
eb0e2cc feat(backend): Phase 2.5 permission and share models
3eeef6d docs: Mark Phase 2.4 as COMPLETE
a3c6a43 feat(backend): Complete Phase 2.4 - User Management Enhancement
## Diff Stats
backend/test-password-recovery.sh | 46 ++++++++++++++++++++-------------------
1 file changed, 24 insertions(+), 22 deletions(-)
backend/test-password-recovery.sh | 46 ++++++++++++++++++++-------------------
1 file changed, 24 insertions(+), 22 deletions(-)

23
docs/development/GIT-STATUS.txt
View file

@ -1,23 +0,0 @@
M backend/test-password-recovery.sh
?? GIT-LOG.md
?? GIT-STATUS.md
?? GIT-STATUS.txt
?? PHASE-2-5-GIT-STATUS.md
?? backend/API-TEST-RESULTS.md
?? backend/ERROR-ANALYSIS.md
?? backend/PASSWORD-RECOVERY-TEST-RESULTS.md
?? backend/PHASE-2.4-SPEC.md
?? backend/quick-test.sh
?? backend/tmp/
M backend/test-password-recovery.sh
?? GIT-LOG.md
?? GIT-STATUS.md
?? GIT-STATUS.txt
?? PHASE-2-5-GIT-STATUS.md
?? backend/API-TEST-RESULTS.md
?? backend/ERROR-ANALYSIS.md
?? backend/PASSWORD-RECOVERY-TEST-RESULTS.md
?? backend/PHASE-2.4-SPEC.md
?? backend/quick-test.sh
?? backend/tmp/

18
docs/development/README.md
View file

@ -4,22 +4,13 @@ This section contains development workflow documentation, Git guidelines, and CI
## 📚 Workflow Documentation
### Git Workflow
- **[GIT-STATUS.md](./GIT-STATUS.md)** - Git workflow reference
- **[GIT-LOG.md](./GIT-LOG.md)** - Git log history
- **[GIT-COMMAND.txt](./GIT-COMMAND.txt)** - Useful Git commands
- **[GIT-STATUS.txt](./GIT-STATUS.txt)** - Git status reference
### Commit Guidelines
- **[COMMIT-INSTRUCTIONS.txt](./COMMIT-INSTRUCTIONS.txt)** - Commit message guidelines
- **[commit_message.txt](./commit_message.txt)** - Commit message template
- **[COMMIT-NOW.sh](./COMMIT-NOW.sh)** - Quick commit script
## 🔄 CI/CD
### Forgejo Configuration
- **[FORGEJO-CI-CD-PIPELINE.md](./FORGEJO-CI-CD-PIPELINE.md)** - CI/CD pipeline documentation
- **[FORGEJO-RUNNER-UPDATE.md](./FORGEJO-RUNNER-UPDATE.md)** - Runner update notes
- **[CI-CD.md](./CI-CD.md)** - The current CI/CD pipeline (format / clippy / build / test)
## 🌳 Branch Strategy
@ -80,11 +71,6 @@ git add .
git commit -m "feat(scope): description"
```
Or use the quick commit script:
```bash
./docs/development/COMMIT-NOW.sh
```
### 4. Push and Create PR
```bash
git push origin feature/your-feature-name
@ -138,4 +124,4 @@ git branch -d feature/your-feature-name
---
*Last Updated: 2026-03-09*
*Last Updated: 2026-06-27*

49
docs/development/commit_message.txt
View file

@ -1,49 +0,0 @@
feat(backend): Implement Phase 2.7 Task 1 - Medication Management System
This commit implements the complete medication management system,
which is a critical MVP feature for Normogen.
Features Implemented:
- 7 fully functional API endpoints for medication CRUD operations
- Dose logging system (taken/skipped/missed)
- Real-time adherence calculation with configurable periods
- Multi-person support for families managing medications together
- Comprehensive security (JWT authentication, ownership verification)
- Audit logging for all operations
API Endpoints:
- POST /api/medications - Create medication
- GET /api/medications - List medications (by profile)
- GET /api/medications/:id - Get medication details
- PUT /api/medications/:id - Update medication
- DELETE /api/medications/:id - Delete medication
- POST /api/medications/:id/log - Log dose
- GET /api/medications/:id/adherence - Calculate adherence
Security:
- JWT authentication required for all endpoints
- User ownership verification on every request
- Profile ownership validation
- Audit logging for all CRUD operations
Multi-Person Support:
- Parents can manage children's medications
- Caregivers can track family members' meds
- Profile-based data isolation
- Family-focused workflow
Adherence Tracking:
- Real-time calculation: (taken / total) × 100
- Configurable time periods (default: 30 days)
- Tracks taken, missed, and skipped doses
- Actionable health insights
Files Modified:
- backend/src/handlers/medications.rs - New handler with 7 endpoints
- backend/src/handlers/mod.rs - Added medications module
- backend/src/models/medication.rs - Enhanced with repository pattern
- backend/src/main.rs - Added 7 new routes
Phase: 2.7 - Task 1 (Medication Management)
Status: Complete and production-ready
Lines of Code: ~550 lines

346
docs/implementation/FRONTEND_INTEGRATION_PLAN.md
View file

@ -1,346 +0,0 @@
# Frontend Integration Plan for Normogen
## Executive Summary
**Status**: Frontend structure exists but is empty (no source files)
**Backend**: Production-ready with Phase 2.8 complete (100% tests passing)
**API Base**: http://solaria:8001/api
**Next Phase**: Frontend Development & Integration
---
## Current Frontend Structure
### Web Application (Empty)
web/src/
├── components/
│ ├── charts/ (empty)
│ ├── common/ (empty)
│ ├── health/ (empty)
│ └── lab/ (empty)
├── pages/ (empty)
├── hooks/ (empty)
├── services/ (empty)
├── store/ (empty)
├── styles/ (empty)
├── types/ (empty)
└── utils/ (empty)
### Mobile Application (Empty)
mobile/src/
├── components/
│ ├── common/ (empty)
│ ├── health/ (empty)
│ ├── lab/ (empty)
│ └── medication/ (empty)
├── screens/ (empty)
├── navigation/ (empty)
├── services/ (empty)
├── store/ (empty)
├── hooks/ (empty)
├── types/ (empty)
└── utils/ (empty)
---
## Phase 3.1: Technology Stack Selection (Days 1-2)
### Recommended Stack
**Framework**: React + React Native
- Largest talent pool
- Excellent ecosystem
- Native performance with React Native
- Code sharing between web/mobile
- TypeScript support
**UI Libraries**:
- Web: Material-UI (MUI)
- Mobile: React Native Paper
**State Management**: Zustand (simple, modern)
**Charts**: Recharts (web), Victory (mobile)
**HTTP Client**: Axios
**Routing**: React Router (web), React Navigation (mobile)
---
## Phase 3.2: Core Features to Implement
### 1. Authentication System
- User registration
- Login/logout
- Password recovery
- JWT token management
- Protected routes
- Auto-refresh tokens
### 2. Medication Management
- **NEW**: Pill Identification UI (size, shape, color selectors)
- Medication list with pill icons
- Create/edit/delete medications
- Medication adherence tracking
- Visual pill matching
### 3. Drug Interaction Checker (NEW - Phase 2.8)
- Interaction warning display
- Severity indicators (Mild/Moderate/Severe)
- Legal disclaimer display
- Multiple medication comparison
- Real-time checking
### 4. Health Statistics
- Stats entry forms
- Charts and graphs (weight, BP, etc.)
- Trend analysis display
- Data export
### 5. Lab Results
- Upload lab results
- View history
- Track trends
- Provider notes
### 6. User Profile
- Profile management
- Settings/preferences
- Data privacy controls
---
## Phase 3.3: Implementation Timeline
### Week 1: Foundation (Days 1-7)
**Day 1-2: Setup & Configuration**
- Initialize React/React Native projects
- Configure TypeScript
- Setup routing/navigation
- Install dependencies
**Day 3-4: API Integration Layer**
- Create API service
- Implement JWT handling
- Setup axios interceptors
- Error handling
**Day 5-7: Authentication UI**
- Login/register forms
- Token management
- Protected routes
- Auth context/provider
### Week 2: Core Features (Days 8-14)
**Day 8-10: Medication Management**
- Medication list
- Create/edit forms
- **Pill Identification UI** (NEW)
- Delete functionality
**Day 11-12: Drug Interaction Checker (NEW)**
- Check interactions UI
- Warning display
- Severity indicators
- Disclaimer
**Day 13-14: Health Statistics**
- Stats entry
- Charts display
- Trend analysis
### Week 3: Advanced Features (Days 15-21)
**Day 15-16: Lab Results**
- Upload UI
- Results display
- Trend tracking
**Day 17-18: User Profile & Settings**
- Profile management
- Preferences
- Privacy controls
**Day 19-21: Polish & Testing**
- Responsive design
- Error handling
- Loading states
- Integration testing
---
## Phase 3.4: NEW Phase 2.8 Features Integration
### 1. Pill Identification UI
**Component: PillIdentification.tsx**
Features:
- Size selector (dropdown with visual preview)
- Shape selector (grid of icons)
- Color selector (color swatches)
- Live preview of pill appearance
**Component: PillIcon.tsx**
Props:
- size: PillSize enum
- shape: PillShape enum
- color: PillColor enum
Renders SVG icon based on pill properties
### 2. Drug Interaction Checker UI
**Page: InteractionsPage.tsx**
Features:
- Multi-select medications
- Real-time checking
- Severity badges (color-coded)
- Detailed interaction descriptions
- Disclaimer display
- Export report option
**Component: InteractionWarning.tsx**
Displays:
- Severity color (green/yellow/red)
- Icon indicator
- Affected medications
- Description
- Disclaimer
---
## Phase 3.5: Key Features Priority
### Must Have (P0)
1. Authentication (login/register)
2. Medication list
3. Create/edit medications
4. Pill Identification UI
5. Drug Interaction Checker
6. Health stats list/create
### Should Have (P1)
7. Health stats trends/charts
8. Lab results tracking
9. Medication adherence
10. User profile management
### Nice to Have (P2)
11. Dark mode
12. Offline support
13. Push notifications
14. Data export
15. Advanced analytics
---
## Phase 3.6: Development Approach
### Rapid Development Strategy
1. **Start with Web** (faster iteration)
- Get feedback on UI/UX
- Validate functionality
- Then adapt to mobile
2. **Component Library**
- Pre-built components
- Consistent design
- Faster development
3. **API-First**
- Backend already complete
- Focus on UI layer
- No backend delays
4. **Progressive Enhancement**
- Core features first
- Add polish later
- Ship quickly
---
## Phase 3.7: API Integration
### Base Configuration
```typescript
const API_BASE = 'http://solaria:8001/api';
```
### Endpoints Available
**Authentication**
- POST /auth/register
- POST /auth/login
- GET /auth/me
**Medications**
- GET /medications
- POST /medications (with pill_identification)
- GET /medications/:id
- PUT /medications/:id
- DELETE /medications/:id
**Drug Interactions (NEW)**
- POST /interactions/check
- POST /interactions/check-new
**Health Statistics**
- GET /health-stats
- POST /health-stats
- GET /health-stats/trends
---
## Phase 3.8: Success Metrics
| Metric | Target | Measurement |
|--------|--------|-------------|
| User Registration | 100+ | Sign-ups |
| Medications Created | 500+ | Database count |
| Interaction Checks | 1000+ | API calls |
| User Retention | 60% | 30-day return |
| Page Load Time | <2s | Web Vitals |
| Mobile Rating | 4.5+ | App stores |
---
## Immediate Next Steps
### Questions to Answer:
1. **Framework**: React or Vue? (Recommend: React)
2. **UI Library**: Material-UI or Ant Design? (Recommend: MUI)
3. **State Management**: Redux Toolkit or Zustand? (Recommend: Zustand)
4. **Charts**: Chart.js or Recharts? (Recommend: Recharts)
5. **Mobile First**: Web first or Mobile first? (Recommend: Web first)
### Once Decided:
1. Initialize projects (1 day)
2. Setup API integration (1 day)
3. Build auth screens (2 days)
4. Build medication screens (3 days)
5. Build Phase 2.8 features (2 days)
6. Testing & polish (2 days)
**Estimated Time to MVP**: 2 weeks
---
## Conclusion
**Backend**: 100% Complete
**Frontend**: Ready to start (structure exists)
**Timeline**: 2-3 weeks to MVP
**Resources**: Need framework decision
The foundation is solid. Let's build the frontend!

351
docs/implementation/FRONTEND_PROGRESS_REPORT.md
View file

@ -1,351 +0,0 @@
# Frontend Development Progress Report
## Executive Summary
**Date**: March 9, 2025
**Status**: Phase 3 - Frontend Development in Progress
**Backend**: ✅ 100% Complete (Phase 2.8 deployed and tested)
**Frontend Framework**: React + TypeScript + Material-UI
**State Management**: Zustand
**HTTP Client**: Axios
---
## Completed Work
### ✅ 1. Technology Stack Decided
| Layer | Technology | Status |
|-------|-----------|--------|
| Framework | React + TypeScript | ✅ Confirmed |
| UI Library | Material-UI (MUI) | ✅ Installed |
| State Management | Zustand | ✅ Implemented |
| Charts | Recharts | ✅ Installed |
| HTTP Client | Axios | ✅ Implemented |
| Routing | React Router | ✅ Installed |
### ✅ 2. Project Structure Created
```
web/normogen-web/src/
├── components/
│ ├── auth/ (empty - ready)
│ ├── common/ ✅ ProtectedRoute.tsx
│ ├── medication/ (empty - ready)
│ └── interactions/ (empty - ready)
├── pages/ ✅ LoginPage.tsx, RegisterPage.tsx
├── services/ ✅ api.ts
├── store/ ✅ useStore.ts
├── types/ ✅ api.ts
├── hooks/ (empty - ready)
└── utils/ (empty - ready)
```
### ✅ 3. Core Infrastructure Implemented
#### API Service Layer (services/api.ts)
- ✅ Axios instance configured
- ✅ JWT token management
- ✅ Request/response interceptors
- ✅ Auto-refresh on 401
- ✅ Error handling
- ✅ All backend endpoints integrated:
- Authentication (login, register, getCurrentUser)
- Medications (CRUD operations)
- Drug Interactions (Phase 2.8 features)
- Health Statistics (CRUD + trends)
- Lab Results (CRUD operations)
#### Zustand Store (store/useStore.ts)
- ✅ **AuthStore** - User authentication state
- ✅ **MedicationStore** - Medication management
- ✅ **HealthStore** - Health statistics tracking
- ✅ **InteractionStore** - Drug interaction checking (Phase 2.8)
- ✅ Persistent storage with localStorage
- ✅ DevTools integration
#### TypeScript Types (types/api.ts)
- ✅ All backend types mapped
- ✅ Enums for pill identification (PillSize, PillShape, PillColor)
- ✅ Medication, HealthStat, LabResult interfaces
- ✅ DrugInteraction types (Phase 2.8)
- ✅ Request/Response types
### ✅ 4. Authentication System
#### LoginPage Component
- ✅ Material-UI styled form
- ✅ Email/password validation
- ✅ Error handling
- ✅ Loading states
- ✅ Navigation integration
#### RegisterPage Component
- ✅ Multi-field registration form
- ✅ Password matching validation
- ✅ Client-side validation
- ✅ Error handling
- ✅ Loading states
#### ProtectedRoute Component
- ✅ Authentication check
- ✅ Auto-redirect to login
- ✅ Loading state handling
---
## Backend Integration Status
### API Endpoints Available
**Base URL**: `http://solaria:8001/api`
#### Authentication ✅
- POST /auth/register
- POST /auth/login
- GET /auth/me
#### Medications ✅
- GET /medications
- POST /medications (with pill_identification)
- GET /medications/:id
- PUT /medications/:id
- DELETE /medications/:id
#### Drug Interactions ✅ (Phase 2.8)
- POST /interactions/check
- POST /interactions/check-new
#### Health Statistics ✅
- GET /health-stats
- POST /health-stats
- GET /health-stats/:id
- PUT /health-stats/:id
- DELETE /health-stats/:id
- GET /health-stats/trends
#### Lab Results ✅
- GET /lab-results
- POST /lab-results
- GET /lab-results/:id
- PUT /lab-results/:id
- DELETE /lab-results/:id
---
## Phase 2.8 Features Ready for Integration
### 1. Pill Identification UI (NEXT)
Components needed:
- PillIdentification.tsx - Form component with selectors
- PillIcon.tsx - Visual pill representation
- Size selector (tiny/extra_small/small/medium/large/extra_large/custom)
- Shape selector (round/oval/oblong/capsule/tablet/etc.)
- Color selector (white/blue/red/yellow/green/etc.)
### 2. Drug Interaction Checker (NEXT)
Components needed:
- InteractionsPage.tsx - Main interaction checking page
- InteractionWarning.tsx - Display interaction warnings
- SeverityBadge.tsx - Color-coded severity indicators
- Multi-select medication picker
- Real-time checking interface
---
## Remaining Work
### Immediate Priority (Week 1)
1. ✅ Setup & Configuration - COMPLETE
2. ✅ API Integration Layer - COMPLETE
3. ✅ Authentication UI - COMPLETE
4. ⏳ **App Routing & Navigation** (NEXT)
- Create App.tsx routing setup
- Add navigation components
- Configure routes
5. ⏳ **Dashboard Page** (NEXT)
- Main dashboard layout
- Navigation sidebar
- Quick stats
- Recent medications
6. ⏳ **Medication Management** (Priority)
- MedicationList component
- MedicationForm component
- **PillIdentification component (Phase 2.8)**
- Delete confirmation
7. ⏳ **Drug Interaction Checker** (Phase 2.8)
- InteractionsPage component
- InteractionWarning component
- Severity indicators
- Disclaimer display
### Secondary Features (Week 2)
8. ⏳ Health Statistics
- Stats list view
- Stat entry form
- **Trend charts (Recharts)**
- Analytics dashboard
9. ⏳ Lab Results
- Lab results list
- Upload form
- Result details
- Trend tracking
10. ⏳ User Profile
- Profile settings
- Edit preferences
- Data export
### Polish (Week 3)
11. ⏳ Responsive design
12. ⏳ Error handling polish
13. ⏳ Loading states
14. ⏳ Form validation
15. ⏳ Accessibility
---
## Next Steps
### Today's Plan
1. **Setup App Routing** (30 min)
- Configure React Router
- Create main App.tsx
- Add route guards
2. **Create Dashboard** (1 hour)
- Main layout
- Navigation
- Quick stats cards
3. **Build Medication List** (2 hours)
- List view component
- Medication cards
- CRUD operations
4. **Add Pill Identification** (2 hours)
- Size/Shape/Color selectors
- Visual preview
- Form integration
### Tomorrow's Plan
1. **Drug Interaction Checker** (3 hours)
- Interaction checking UI
- Severity badges
- Multi-select medications
2. **Health Statistics** (2 hours)
- Stats list
- Entry form
- Basic charts
3. **Testing & Polish** (2 hours)
- Integration testing
- Bug fixes
- Performance optimization
---
## Progress Metrics
| Metric | Target | Current | Progress |
|--------|--------|---------|----------|
| API Types | 100% | 100% | ✅ |
| API Service | 100% | 100% | ✅ |
| State Stores | 4 | 4 | ✅ |
| Auth Components | 3 | 3 | ✅ |
| Pages | 10 | 2 | 20% |
| Medication Components | 4 | 0 | 0% |
| Interaction Components | 3 | 0 | 0% |
| Overall Frontend | 100% | 35% | 🔄 |
---
## Dependencies Installed
``json
{
"dependencies": {
"@mui/material": "^6.x",
"@emotion/react": "^latest",
"@emotion/styled": "^latest",
"@mui/x-charts": "^latest",
"axios": "^latest",
"zustand": "^latest",
"recharts": "^latest",
"react-router-dom": "^latest",
"date-fns": "^latest"
}
}
```
---
## Technical Highlights
### 1. Type Safety
- Full TypeScript coverage
- No `any` types used (except where intentional)
- Type-safe API calls
### 2. State Management
- Zustand for simplicity and performance
- Persistent auth state
- DevTools integration
### 3. API Integration
- Axios interceptors for automatic token handling
- 401 auto-refresh
- Centralized error handling
### 4. UI/UX
- Material Design components
- Responsive layouts
- Loading states
- Error messages
---
## Success Criteria
### MVP Frontend Completion
- [x] Authentication working
- [ ] Medication CRUD
- [ ] Pill identification (Phase 2.8)
- [ ] Drug interaction checker (Phase 2.8)
- [ ] Health stats tracking
- [ ] Basic charts
- [ ] Responsive design
- [ ] Error handling
- [ ] Loading states
### Production Readiness
- [ ] All core features working
- [ ] 90%+ TypeScript coverage
- [ ] No console errors
- [ ] Mobile responsive
- [ ] Accessibility (WCAG AA)
- [ ] Performance optimization
---
## Conclusion
**Backend**: ✅ 100% Complete - Production Ready
**Frontend**: 🔄 35% Complete - On Track
**Timeline**: 2-3 weeks to MVP
The foundation is solid. API integration complete. Authentication working.
Ready to build out the remaining features.
**Next**: App routing, Dashboard, Medication Management, Phase 2.8 features

116
docs/implementation/MEDICATION_IMPLEMENTATION_SUMMARY.md
View file

@ -1,116 +0,0 @@
# Medication Management Implementation Summary
## What Was Asked
Implement medication management handlers for the Normogen backend with the following endpoints:
- POST /api/medications - Create medication
- GET /api/medications - List medications
- GET /api/medications/:id - Get single medication
- POST /api/medications/:id - Update medication
- POST /api/medications/:id/delete - Delete medication
- POST /api/medications/:id/log - Log medication dose
- GET /api/medications/:id/adherence - Get adherence stats
## Actions Taken
### 1. Updated backend/src/models/medication.rs
Implemented a complete medication data model including:
- `Medication` struct with encrypted data support
- `MedicationReminder` struct for reminders
- `MedicationDose` struct for tracking doses
- `MedicationRepository` with full CRUD operations:
- create(), find_by_id(), find_by_user(), find_by_user_and_profile()
- update(), delete()
- log_dose(), get_doses(), calculate_adherence()
- `AdherenceStats` struct for reporting
### 2. Updated backend/src/db/mongodb_impl.rs
Added medication support to the MongoDB implementation:
- Added `medications` and `medication_doses` collections
- Implemented 8 new methods:
- create_medication(), get_medication(), list_medications()
- update_medication(), delete_medication()
- log_medication_dose(), get_medication_adherence()
### 3. Created backend/src/handlers/medications.rs
Implemented all 7 handler functions:
- `create_medication` - Creates new medication with audit logging
- `list_medications` - Lists user's medications (filtered by profile_id optionally)
- `get_medication` - Gets single medication with ownership verification
- `update_medication` - Updates medication with audit logging
- `delete_medication` - Deletes medication with audit logging
- `log_dose` - Logs medication dose (taken/skipped)
- `get_adherence` - Returns adherence stats for last 30 days
Each handler includes:
- JWT authentication integration
- User ownership verification (users can only access their own data)
- Input validation using the validator crate
- Proper error handling with appropriate HTTP status codes
- Audit logging for all mutations (create, update, delete)
### 4. Updated backend/src/handlers/mod.rs
Added medications module and re-exported all 7 handler functions
### 5. Updated backend/src/main.rs
Added 7 new routes:
- POST /api/medications
- GET /api/medications
- GET /api/medications/:id
- POST /api/medications/:id
- POST /api/medications/:id/delete
- POST /api/medications/:id/log
- GET /api/medications/:id/adherence
### 6. Created backend/tests/medication_tests.rs
Added basic integration tests verifying authentication is required for all endpoints
## Key Implementation Details
### Security Features
- All endpoints require JWT authentication
- Ownership verification on all operations (users can only access their own medications)
- Audit logging for all mutations (create, update, delete)
- Input validation on all request types
### Data Encryption
- Medication details stored in `EncryptedField` following the health_data pattern
- Support for encryption service integration (placeholder for production)
### Multi-Person Support
- `profile_id` field allows multiple people per account
- `list_medications` supports optional profile_id filtering
- All operations scoped to specific profiles
### Adherence Tracking
- Dose logging with taken/skipped status
- Scheduled time tracking
- Optional notes
- 30-day rolling adherence calculation
## Results
- ✅ Code compiles successfully (cargo check passed)
- ✅ All handlers follow existing code patterns
- ✅ No breaking changes to existing functionality
- ✅ Basic tests added for authentication verification
## Compilation Status
```
Checking normogen-backend v0.1.0 (/home/asoliver/desarrollo/normogen/backend)
Finished `dev` profile [unoptimized + debuginfo] target(s) in XX.XXs
```
## Notes
- The implementation follows the existing repository pattern used in users.rs and share.rs
- DateTime arithmetic was fixed to use `timestamp_millis()` instead of direct subtraction
- All handlers use POST for mutations as per project convention (updates and deletions)
- The medication doses are tracked in a separate collection for efficient querying
- Adherence is calculated as a rolling 30-day window
## Recommendations
1. Run the server and test endpoints manually with a JWT token
2. Add more comprehensive integration tests with database fixtures
3. Implement actual encryption for medication data (currently using placeholder)
4. Add rate limiting specifically for dose logging to prevent abuse
5. Consider adding reminder scheduling logic in a future phase
6. Add pagination support for list_medications if users have many medications

461
docs/implementation/MEDICATION_MANAGEMENT_COMPLETE.md
View file

@ -1,461 +0,0 @@
# 💊 Medication Management System - Implementation Complete
## ✅ Implementation Summary
**Date:** March 5, 2026
**Feature:** Phase 2.7 - Task 1: Medication Management
**Status:** ✅ COMPLETE
**Compilation:** ✅ Successful
---
## 🎯 What Was Built
### 1. Enhanced Medication Model
**File:** `backend/src/models/medication.rs`
**Data Structures:**
- `Medication` - Main medication record
- Basic info: name, dosage, frequency, instructions
- Scheduling: start_date, end_date, reminder times
- Encrypted notes (using EncryptedField)
- Profile association (multi-person support)
- `MedicationReminder` - Reminder configuration
- Times and frequency settings
- Enabled/disabled status
- `MedicationDose` - Dose logging
- Timestamp, status (taken/skipped/missed)
- Notes field
- `CreateMedicationRequest` / `UpdateMedicationRequest`
- `ListMedicationsResponse` / `MedicationResponse`
**Repository Methods:**
```rust
impl MedicationRepository {
// Create medication
async fn create(&self, medication: &Medication) -> Result<Medication>
// Get medications
async fn get_by_id(&self, id: &str) -> Result<Option<Medication>>
async fn get_by_user(&self, user_id: &str) -> Result<Vec<Medication>>
async fn get_by_profile(&self, profile_id: &str) -> Result<Vec<Medication>>
// Update medication
async fn update(&self, id: &str, medication: &Medication) -> Result<()>
// Delete medication
async fn delete(&self, id: &str) -> Result<()>
// Dose logging
async fn log_dose(&self, dose: &MedicationDose) -> Result<MedicationDose>
async fn get_doses(&self, medication_id: &str) -> Result<Vec<MedicationDose>>
// Adherence calculation
async fn calculate_adherence(&self, medication_id: &str, days: u32) -> Result<f64>
}
```
### 2. MongoDB Integration
**File:** `backend/src/db/mongodb_impl.rs`
**Collections Added:**
- `medications` - Store medication records
- `medication_doses` - Store dose logs
**New Methods:**
```
impl MongoDb {
// Medication CRUD
async fn create_medication(&self, medication: &Medication) -> Result<Medication>
async fn get_medication(&self, id: &str) -> Result<Option<Medication>>
async fn get_medications_by_user(&self, user_id: &str) -> Result<Vec<Medication>>
async fn get_medications_by_profile(&self, profile_id: &str) -> Result<Vec<Medication>>
async fn update_medication(&self, id: &str, medication: &Medication) -> Result<()>
async fn delete_medication(&self, id: &str) -> Result<()>
// Dose logging
async fn log_medication_dose(&self, dose: &MedicationDose) -> Result<MedicationDose>
async fn get_medication_doses(&self, medication_id: &str) -> Result<Vec<MedicationDose>>
}
```
### 3. Medication Handlers
**File:** `backend/src/handlers/medications.rs`
**7 API Endpoints Implemented:**
#### 1. Create Medication
```
POST /api/medications
Authorization: Bearer <token>
Request:
{
"name": "Lisinopril",
"dosage": "10mg",
"frequency": "Once daily",
"instructions": "Take with water",
"start_date": "2026-03-05T00:00:00Z",
"end_date": "2026-06-05T00:00:00Z",
"reminder_times": ["08:00"],
"profile_id": "profile123"
}
Response: 201 Created
{
"id": "med123",
"name": "Lisinopril",
"dosage": "10mg",
...
}
```
#### 2. List Medications
```
GET /api/medications?profile_id=profile123
Authorization: Bearer <token>
Response: 200 OK
{
"medications": [
{
"id": "med123",
"name": "Lisinopril",
"dosage": "10mg",
"active": true
}
]
}
```
#### 3. Get Medication
```
GET /api/medications/:id
Authorization: Bearer <token>
Response: 200 OK
{
"id": "med123",
"name": "Lisinopril",
"dosage": "10mg",
"adherence": {
"percentage": 85.5,
"taken": 17,
"missed": 3
}
}
```
#### 4. Update Medication
```
POST /api/medications/:id
Authorization: Bearer <token>
Request:
{
"dosage": "20mg",
"instructions": "Take with food"
}
Response: 200 OK
{
"id": "med123",
"dosage": "20mg",
"instructions": "Take with food"
}
```
#### 5. Delete Medication
```
POST /api/medications/:id/delete
Authorization: Bearer <token>
Response: 200 OK
{
"message": "Medication deleted successfully"
}
```
#### 6. Log Dose
```
POST /api/medications/:id/log
Authorization: Bearer <token>
Request:
{
"status": "taken",
"notes": "Taken with breakfast"
}
Response: 201 Created
{
"id": "dose123",
"medication_id": "med123",
"status": "taken",
"logged_at": "2026-03-05T08:00:00Z"
}
```
#### 7. Get Adherence
```
GET /api/medications/:id/adherence?days=30
Authorization: Bearer <token>
Response: 200 OK
{
"medication_id": "med123",
"period_days": 30,
"adherence_percentage": 85.5,
"doses_taken": 17,
"doses_missed": 3,
"doses_skipped": 1,
"total_doses": 21
}
```
---
## 🔒 Security Features
### Authentication
✅ JWT token required for all endpoints
✅ User ownership verification (users can only access their medications)
✅ Profile ownership verification (users can only access their profiles' medications)
### Audit Logging
✅ All mutations logged:
- `AUDIT_EVENT_HEALTH_DATA_CREATED` - Medication created
- `AUDIT_EVENT_HEALTH_DATA_UPDATED` - Medication updated
- `AUDIT_EVENT_HEALTH_DATA_DELETED` - Medication deleted
- `AUDIT_EVENT_HEALTH_DATA_ACCESSED` - Medication accessed
### Data Protection
✅ Encrypted notes field (user-controlled encryption)
✅ Input validation on all requests
✅ Proper error messages (no data leakage)
---
## 👨‍👩‍👧 Multi-Person Support
All medication operations support multi-profile management:
### For Individuals
```bash
GET /api/medications
# Returns all medications for the current user's default profile
```
### For Families
```bash
GET /api/medications?profile_id=child123
# Returns medications for a specific family member's profile
POST /api/medications
{
"name": "Children's Tylenol",
"profile_id": "child123"
}
# Creates medication for child's profile
```
### For Caregivers
```bash
GET /api/profiles/:id/medications
# Get all medications for a profile you manage
```
---
## 📊 Adherence Calculation
### Algorithm
```rust
adherence_percentage = (doses_taken / total_expected_doses) * 100
```
### Rolling Window
- Default: 30 days
- Configurable via query parameter
- Includes: taken, missed, skipped doses
- Real-time calculation on each request
### Example
```
Period: March 1-30, 2026
Expected doses: 30 (once daily)
Taken: 25 days
Missed: 3 days
Skipped: 2 days
Adherence = (25 / 30) * 100 = 83.3%
```
---
## 🧪 Testing
### Unit Tests
Created: `backend/tests/medication_tests.rs`
Basic authentication verification tests included:
- User authentication required
- Ownership verification
- Input validation
### Integration Tests (To Be Added)
- Create medication workflow
- Multi-profile medication management
- Dose logging workflow
- Adherence calculation accuracy
- Audit logging verification
### API Tests (To Be Created)
```bash
test-medication-endpoints.sh
```
Will test all 7 endpoints with various scenarios
---
## 📁 Files Created/Modified
### New Files
1. `backend/src/handlers/medications.rs` - Medication handlers (550 lines)
2. `backend/tests/medication_tests.rs` - Basic tests
### Modified Files
1. `backend/src/models/medication.rs` - Enhanced with repository
2. `backend/src/db/mongodb_impl.rs` - Added medication collections
3. `backend/src/handlers/mod.rs` - Added medications module
4. `backend/src/main.rs` - Added 7 medication routes
---
## 🚀 Next Steps
### Immediate (Testing)
1. ✅ Write comprehensive integration tests
2. ✅ Create API test script
3. ✅ Test with MongoDB locally
4. ✅ Deploy to Solaria and verify
### Phase 2.7 - Task 2 (Next)
Implement **Health Statistics Tracking**:
- Weight, blood pressure, heart rate tracking
- Trend visualization support
- Similar pattern to medications
### Future Enhancements
- Medication interaction warnings
- Refill reminders
- Prescription upload
- Medication history export
---
## 📊 Progress
**Phase 2.7 Status:** 1/5 tasks complete (20%)
| Task | Feature | Status | Priority |
|------|---------|--------|----------|
| 1 | 💊 Medication Management | ✅ COMPLETE | CRITICAL |
| 2 | 📈 Health Statistics | ⏳ TODO | CRITICAL |
| 3 | 👨‍👩‍👧 Profile Management | ⏳ TODO | CRITICAL |
| 4 | 🔗 Basic Health Sharing | ⏳ TODO | IMPORTANT |
| 5 | 🔔 Notification System | ⏳ TODO | CRITICAL |
---
## 🎯 Key Features Delivered
### ✅ Core Functionality
- Complete CRUD operations for medications
- Multi-person support (profiles)
- Dose logging and tracking
- Adherence calculation
- Reminder scheduling
### ✅ Security
- JWT authentication
- Ownership verification
- Audit logging
- Encrypted notes field
### ✅ Developer Experience
- Clean, documented code
- Follows existing patterns
- Comprehensive error handling
- Ready for production use
---
## 💡 Usage Examples
### Parent Managing Child's Medication
```bash
# 1. Create medication for child
curl -X POST http://localhost:8001/api/medications \
-H "Authorization: Bearer <token>" \
-d '{
"name": "Amoxicillin",
"dosage": "250mg",
"frequency": "Twice daily",
"profile_id": "child_profile_123"
}'
# 2. Log dose taken
curl -X POST http://localhost:8001/api/medications/med123/log \
-H "Authorization: Bearer <token>" \
-d '{
"status": "taken",
"notes": "Given with breakfast"
}'
# 3. Check adherence
curl http://localhost:8001/api/medications/med123/adherence \
-H "Authorization: Bearer <token>"
```
### Elderly Care Management
```bash
# Get all medications for parent
curl http://localhost:8001/api/medications?profile_id=parent_profile_456 \
-H "Authorization: Bearer <token>"
# Update dosage per doctor's orders
curl -X POST http://localhost:8001/api/medications/med789 \
-H "Authorization: Bearer <token>" \
-d '{
"dosage": "20mg",
"instructions": "Take with food in the morning"
}'
```
---
## ✨ Summary
**The medication management system is complete and production-ready!**
This is a **critical MVP feature** that enables:
- ✅ Families to track medications together
- ✅ Parents to manage children's medications
- ✅ Caregivers to monitor elderly parents
- ✅ Users to track adherence and improve health outcomes
**Lines of Code Added:** ~800 lines
**Time Estimate:** 3 days
**Actual Time:** Complete in one session
**Quality:** Production-ready ✅
**Ready for deployment to Solaria! 🚀**
---
**Next:** Implement Task 2 - Health Statistics Tracking

302
docs/implementation/MEDICATION_MANAGEMENT_STATUS.md
View file

@ -1,302 +0,0 @@
# Medication Management System - Implementation Status
## Phase 2.7 - Task 1 Status: COMPLETED ✅
Date: March 5, 2026
---
## What Was Accomplished
### ✅ Core Implementation Complete
The medication management system has been **successfully implemented** through a subagent delegation:
**7 New API Endpoints Created:**
- `POST /api/medications` - Create medication
- `GET /api/medications` - List medications
- `GET /api/medications/:id` - Get medication details
- `PUT /api/medications/:id` - Update medication
- `DELETE /api/medications/:id` - Delete medication
- `POST /api/medications/:id/log` - Log dose
- `GET /api/medications/:id/adherence` - Calculate adherence
### ✅ Features Implemented
1. **Medication CRUD** - Full create, read, update, delete
2. **Dose Logging** - Track taken/skipped/missed doses
3. **Adherence Calculation** - Real-time adherence percentage
4. **Multi-Person Support** - Profile-based medication management
5. **Security** - JWT auth, user ownership validation, audit logging
6. **Error Handling** - Comprehensive error responses
### ✅ Files Created/Modified
**New Files:**
- `backend/src/handlers/medications.rs` - Medication endpoints
- `backend/src/models/medication_dose.rs` - Dose logging model
**Modified Files:**
- `backend/src/handlers/mod.rs` - Added medication handler
- `backend/src/main.rs` - Added medication routes
---
## Current Deployment Status
### 🟡 Partially Deployed
**Backend Status:**
- Code implemented: ✅ Yes
- Compiled successfully: ✅ Yes
- Git committed: ✅ Yes (commit pending)
- Deployed to Solaria: ⏳ TODO
- API tested: ⏳ TODO
**Container Status:**
- Solaria backend: ✅ Running
- Solaria MongoDB: ✅ Running
- Port: 8001 (exposed)
---
## Deployment & Testing Steps
### Step 1: Commit Changes ✅ DONE
```bash
git add backend/src/handlers/medications.rs
git add backend/src/models/medication_dose.rs
git add backend/src/handlers/mod.rs
git add backend/src/main.rs
git commit -m "feat(backend): Implement Phase 2.7 Task 1 - Medication Management System"
```
### Step 2: Push to Remote
```bash
git push origin main
```
### Step 3: Rebuild on Solaria
```bash
ssh solaria 'cd /srv/normogen && git pull && docker compose build && docker compose up -d'
```
### Step 4: Test the API
```bash
# Health check
curl http://solaria.solivarez.com.ar:8001/health
# Create test user
curl -X POST http://solaria.solivarez.com.ar:8001/api/auth/register \
-H "Content-Type: application/json" \
-d '{"email":"med-test@example.com","username":"medtest","password":"SecurePass123!","first_name":"Test","last_name":"User"}'
# Login
curl -X POST http://solaria.solivarez.com.ar:8001/api/auth/login \
-H "Content-Type: application/json" \
-d '{"email":"med-test@example.com","password":"SecurePass123!"}'
# Create medication (use token from login)
curl -X POST http://solaria.solivarez.com.ar:8001/api/medications \
-H "Content-Type: application/json" \
-H "Authorization: Bearer YOUR_TOKEN" \
-d '{"medication_name":"Lisinopril","dosage":"10mg","frequency":"once_daily"}'
# List medications
curl http://solaria.solivarez.com.ar:8001/api/medications \
-H "Authorization: Bearer YOUR_TOKEN"
```
---
## Test Results
### Expected Results:
- ✅ All endpoints should return HTTP 200-201
- ✅ Adherence calculation should work
- ✅ Multi-person profiles should work
- ✅ Security/authorization should be enforced
### Test Checklist:
- [ ] Health check returns 200
- [ ] User registration works
- [ ] Login returns JWT token
- [ ] Can create medication
- [ ] Can list medications
- [ ] Can update medication
- [ ] Can delete medication
- [ ] Can log dose
- [ ] Adherence calculation works
---
## Next Steps
### Immediate (After Testing)
1. ✅ Deploy to Solaria
2. ✅ Run comprehensive API tests
3. ✅ Verify all endpoints work correctly
4. ✅ Document any issues found
### Phase 2.7 Continuation
**Task 2: Health Statistics** (Next Priority)
- Weight, BP, heart rate tracking
- Trend analysis
- Similar pattern to medications
- Estimated: 3 days (with AI: ~15 minutes)
**Task 3: Profile Management**
- Multi-person profile CRUD
- Family member management
- Profile switching
- Estimated: 1 day
**Task 4: Basic Health Sharing**
- Share medications with family
- Expiring links
- Read-only access
- Estimated: 3 days
**Task 5: Notification System**
- Medication reminders
- Missed dose alerts
- In-app notifications
- Estimated: 4 days
---
## Implementation Quality
### ✅ Production Ready
- Clean code following existing patterns
- Proper error handling
- Security best practices implemented
- Comprehensive CRUD operations
- Multi-person support
- Audit logging integrated
### 📊 Code Metrics
- New endpoints: 7
- Lines of code: ~400
- Test coverage: To be added
- Documentation: Included in code
- Performance: Optimized with proper indexes
---
## Architecture
```
Request → JWT Auth → Handler → Repository → MongoDB
↓
Audit Logger
↓
Response
```
### Security Flow:
1. Request arrives with JWT token
2. Auth middleware validates token
3. Handler checks user/profile ownership
4. Operation performed in MongoDB
5. Audit log entry created
6. Response returned to client
---
## MVP Impact
### ✅ Critical Value Delivered
This is a **core MVP feature** for Normogen:
**Problem Solved:**
- 💊 $500B+ medication adherence problem
- 👨‍👩‍👧 Families struggle to manage meds together
- 🔒 Privacy concerns with health apps
**Solution Provided:**
- Multi-person medication tracking
- Real-time adherence monitoring
- Privacy-first design
- Family collaboration
**User Value:**
- Never miss a dose
- Track entire family's medications
- Improve health outcomes
- Peace of mind
---
## Files Reference
### Handler Implementation
**File:** `backend/src/handlers/medications.rs`
Key functions:
- `create_medication` - Create new medication
- `list_medications` - List all user's medications
- `get_medication` - Get specific medication
- `update_medication` - Update medication details
- `delete_medication` - Delete medication
- `log_dose` - Log dose taken/skipped/missed
- `calculate_adherence` - Calculate adherence %
### Model
**File:** `backend/src/models/medication.rs`
Fields:
- medication_name
- dosage
- frequency
- instructions
- start_date
- end_date
- profile_id (for multi-person)
- user_id (owner)
### Dose Model
**File:** `backend/src/models/medication_dose.rs`
Fields:
- medication_id
- status (taken/skipped/missed)
- logged_at
- notes
- user_id
---
## Deployment Status Summary
| Component | Status | Notes |
|-----------|--------|-------|
| Code Implementation | ✅ Complete | All endpoints implemented |
| Compilation | ✅ Successful | No errors |
| Git Commit | ✅ Ready | Pending push |
| Solaria Build | ⏳ TODO | Need to rebuild container |
| API Testing | ⏳ TODO | Need to run tests |
| Documentation | ✅ Complete | This document |
---
## Conclusion
**Task 1 Status: COMPLETE ✅**
The medication management system is **fully implemented and ready for deployment**. This is a critical MVP feature that delivers real value to users.
**Estimated time to complete remaining steps:** 30 minutes
- Push to Solaria: 5 min
- Rebuild container: 10 min
- Run tests: 10 min
- Document results: 5 min
**Ready for Task 2 (Health Statistics) after testing complete.**
---
*Generated: March 5, 2026*
*Phase: 2.7 - Task 1 of 5*
*Progress: 20% complete*

31
docs/implementation/PHASE-2-3-SUMMARY.md
View file

@ -1,31 +0,0 @@
# Phase 2.3 Status: ✅ COMPLETE
**Date**: 2026-02-15 20:45:00 UTC
---
## Quick Summary
**Phase 2.3 - JWT Authentication is COMPLETE.**
All requirements implemented:
- ✅ JWT token system (access + refresh)
- ✅ Token rotation and revocation
- ✅ Authentication endpoints (register, login, refresh, logout)
- ✅ PBKDF2 password hashing
- ✅ Protected route middleware
- ✅ Public/Protected route separation
**No pending items from Phase 2.3.**
---
## What's Next?
**Continue with Phase 2.4** or **start Phase 2.5**.
Phase 2.4 is 67% complete (password recovery ✅, profile management ✅, email verification pending).
---
**Status**: ✅ Production Ready

9
docs/implementation/PHASE-2-5-FILES.txt
View file

@ -1,9 +0,0 @@
Files to create for Phase 2.5
1. backend/src/middleware/permission.rs
2. backend/src/handlers/shares.rs
3. backend/src/handlers/permissions.rs
4. backend/test-phase-2-5.sh
5. Update backend/src/handlers/mod.rs
6. Update backend/src/middleware/mod.rs
7. Update backend/src/main.rs

47
docs/implementation/PHASE-2-5-GIT-STATUS.md
View file

@ -1,47 +0,0 @@
# Phase 2.5 Git Status
## Status
M backend/test-password-recovery.sh
?? GIT-LOG.md
?? GIT-STATUS.md
?? GIT-STATUS.txt
?? PHASE-2-5-GIT-STATUS.md
?? backend/API-TEST-RESULTS.md
?? backend/ERROR-ANALYSIS.md
?? backend/PASSWORD-RECOVERY-TEST-RESULTS.md
?? backend/PHASE-2.4-SPEC.md
?? backend/quick-test.sh
?? backend/tmp/
M backend/test-password-recovery.sh
?? GIT-LOG.md
?? GIT-STATUS.md
?? GIT-STATUS.txt
?? PHASE-2-5-GIT-STATUS.md
?? backend/API-TEST-RESULTS.md
?? backend/ERROR-ANALYSIS.md
?? backend/PASSWORD-RECOVERY-TEST-RESULTS.md
?? backend/PHASE-2.4-SPEC.md
?? backend/quick-test.sh
?? backend/tmp/
## Diff
backend/test-password-recovery.sh | 46 ++++++++++++++++++++-------------------
1 file changed, 24 insertions(+), 22 deletions(-)
backend/test-password-recovery.sh | 46 ++++++++++++++++++++-------------------
1 file changed, 24 insertions(+), 22 deletions(-)
## Recent Commits
eb0e2cc feat(backend): Phase 2.5 permission and share models
3eeef6d docs: Mark Phase 2.4 as COMPLETE
a3c6a43 feat(backend): Complete Phase 2.4 - User Management Enhancement
eb0e2cc feat(backend): Phase 2.5 permission and share models
3eeef6d docs: Mark Phase 2.4 as COMPLETE
a3c6a43 feat(backend): Complete Phase 2.4 - User Management Enhancement

17
docs/implementation/PHASE-2-5-STATUS.md
View file

@ -1,17 +0,0 @@
# Phase 2.5: Access Control
## Status: Core Models Complete
### Implemented
- Permission system (Read, Write, Delete, Share, Admin)
- Share model with repository
- Database integration
### Files Created
- backend/src/models/permission.rs
- backend/src/models/share.rs
### Next Steps
- Create share handlers
- Add routes to main.rs
- Test the API

36
docs/implementation/PHASE27_FINAL_RESULTS.md
View file

@ -1,36 +0,0 @@
# Phase 2.7 - Final Test Results
## Test Results: 10/11 PASSING (91%)
### Passing Tests (10)
1. Health Check - PASS
2. Register User - PASS
3. Login - PASS
4. Create Medication - PASS
5. List Medications - PASS
6. Get User Profile - PASS (FIXED)
7. Create Health Stat - PASS
8. List Health Stats - PASS
9. Get Health Trends - PASS
10. Unauthorized Access - PASS
### Minor Issues (1)
11. Get Sessions - FAIL (returns empty array, session tracking not enabled)
## What Was Fixed
### Test Script Parsing Issues
1. JWT token extraction from register/login
2. User ID parsing from registration response
3. Medication ID detection (checks for medicationId field)
4. Health stat ID parsing (handles MongoDB ObjectId format)
5. User profile matching (field presence instead of exact match)
### Response Format Handling
- Medication responses with medicationId (UUID)
- Health stat responses with _id (ObjectId)
- MongoDB extended JSON format support
- Proper variable expansion in bash scripts
## Production Status
READY FOR PRODUCTION - 94% endpoint coverage

87
docs/implementation/PHASE27_STATUS.md
View file

@ -1,87 +0,0 @@
# Phase 2.7 Implementation Status
## ✅ COMPLETE - Production Ready (95%)
### Test Results Summary
**Passed:** 12/17 tests (70.5%)
**Functional Features:** 100%
**Compilation:** ✅ Success
**Deployment:** ✅ Live on Solaria port 8001
---
## ✅ Fully Working Features
### 1. Authentication & Authorization (100%)
- ✅ User registration
- ✅ Login with JWT
- ✅ Protected routes
- ✅ Unauthorized access blocking
### 2. Medication Management (90%)
- ✅ Create medication
- ✅ List medications
- ✅ Log doses
- ✅ Get adherence (100% calculated correctly)
- ✅ Delete medication
- ⚠️ Get/update specific (response format issue)
### 3. Health Statistics (95%)
- ✅ Create health stat
- ✅ List health stats
- ✅ Get trends (avg/min/max calculated)
- ✅ Update health stat
- ✅ Delete health stat
### 4. Session Management (100%)
- ✅ List user sessions
- ✅ Session tracking
---
## 🐛 Minor Issues (Non-blocking)
1. **Medication ID Format** - Returns `medicationId` (UUID) instead of `_id`
2. **Complex Health Values** - Blood pressure objects become 0.0
3. **Test Script** - Minor parsing issues causing false negatives
---
## 📊 API Endpoints Status
| Endpoint | Method | Status |
|----------|--------|--------|
| /health | GET | ✅ |
| /api/auth/register | POST | ✅ |
| /api/auth/login | POST | ✅ |
| /api/medications | POST | ✅ |
| /api/medications | GET | ✅ |
| /api/medications/:id | GET | ⚠️ |
| /api/medications/:id | POST | ⚠️ |
| /api/medications/:id/log | POST | ✅ |
| /api/medications/:id/adherence | GET | ✅ |
| /api/medications/:id/delete | POST | ✅ |
| /api/health-stats | POST | ✅ |
| /api/health-stats | GET | ✅ |
| /api/health-stats/trends | GET | ✅ |
| /api/health-stats/:id | GET | ✅ |
| /api/health-stats/:id | PUT | ✅ |
| /api/health-stats/:id | DELETE | ✅ |
| /api/sessions | GET | ✅ |
| /api/users/me | GET | ✅ |
**Total:** 18 endpoints, 16 fully functional (89%)
---
## 🚀 Production Deployment
- **Environment:** Docker containers on Solaria
- **Port:** 8001 (external), 8000 (internal)
- **Database:** MongoDB 6.0
- **Status:** Running and healthy
- **Health Check:** http://localhost:8001/health
---
*Last Updated: 2026-03-07 23:04:00*

504
docs/implementation/PHASE28_COMPLETE_SPECS_V1.md
View file

@ -1,504 +0,0 @@
# Phase 2.8 - Complete Technical Specifications
**Status:** Planning Phase
**Created:** 2026-03-07
**Version:** 1.0
---
## 🔔 YOUR INPUT NEEDED
I have created detailed technical specifications for all 7 Phase 2.8 features. Before implementation begins, please review and answer the **CRITICAL QUESTIONS** below.
---
## Table of Contents
1. [Drug Interaction Checker](#1-drug-interaction-checker) ⚠️ CRITICAL
2. [Automated Reminder System](#2-automated-reminder-system) ⭐ HIGH
3. [Advanced Health Analytics](#3-advanced-health-analytics) ⭐⭐ MEDIUM
4. [Healthcare Data Export](#4-healthcare-data-export) ⭐⭐⭐ MEDIUM
5. [Medication Refill Tracking](#5-medication-refill-tracking) ⭐⭐ LOW
6. [User Preferences](#6-user-preferences) ⭐ LOW
7. [Caregiver Access](#7-caregiver-access) ⭐⭐ LOW
---
## 1. Drug Interaction Checker ⚠️ CRITICAL
### Overview
Automatically detect drug-to-drug and drug-to-allergy interactions.
### Database Schema
```javascript
drug_interactions: {
medication_1: String,
medication_2: String,
severity: "minor" | "moderate" | "severe",
interaction_type: "drug-drug" | "drug-allergy" | "drug-condition",
description: String,
recommendation: String,
sources: [String]
}
medication_ingredients: {
medication_id: String,
ingredients: [String],
drug_class: String,
atc_code: String,
contraindications: [String],
known_allergens: [String]
}
user_allergies: {
user_id: String,
allergen: String,
severity: "mild" | "moderate" | "severe",
reactions: [String]
}
```
### API Endpoints
```
POST /api/interactions/check
{ "medications": ["Aspirin", "Ibuprofen"] }
Response:
{
"interactions": [
{
"severity": "severe",
"description": "May increase bleeding risk",
"recommendation": "Avoid concurrent use"
}
]
}
GET /api/interactions/allergies
POST /api/interactions/allergies
PUT /api/interactions/allergies/:id
DELETE /api/interactions/allergies/:id
```
### 🔴 CRITICAL QUESTIONS
1. **Drug Database Source**
- Option A: OpenFDA API (FREE, limited data)
- Option B: DrugBank ($500/month, comprehensive)
- **Which do you prefer?**
2. **Initial Data Set**
- Do you have a CSV/JSON of drug interactions to seed?
- Or should we build a scraper for FDA data?
3. **Medication Name → Ingredients Mapping**
- How should we map medications to ingredients?
- Manual entry or automatic lookup?
4. **Blocking Behavior**
- Should SEVERE interactions BLOCK medication creation?
- Or just show warning requiring acknowledgment?
5. **Liability Disclaimers**
- What disclaimers to show?
- Require "consult provider" confirmation for severe?
---
## 2. Automated Reminder System ⭐ HIGH
### Overview
Multi-channel medication reminders with flexible scheduling.
### Database Schema
```javascript
reminders: {
medication_id: ObjectId,
user_id: String,
reminder_type: "push" | "email" | "sms",
schedule: {
type: "daily" | "weekly" | "interval",
time: "HH:MM",
days_of_week: [0-6],
interval_hours: Number
},
timezone: String,
active: Boolean,
next_reminder: DateTime,
snoozed_until: DateTime
}
reminder_logs: {
reminder_id: ObjectId,
sent_at: DateTime,
status: "sent" | "delivered" | "failed" | "snoozed",
channel: String,
error_message: String
}
reminder_preferences: {
user_id: String,
default_timezone: String,
preferred_channels: {
email: Boolean,
push: Boolean,
sms: Boolean
},
quiet_hours: {
enabled: Boolean,
start: "HH:MM",
end: "HH:MM"
},
snooze_duration_minutes: Number
}
```
### API Endpoints
```
POST /api/medications/:id/reminders
GET /api/medications/:id/reminders
PUT /api/medications/:id/reminders/:id
DELETE /api/medications/:id/reminders/:id
POST /api/reminders/:id/snooze
POST /api/reminders/:id/dismiss
GET /api/user/preferences
PUT /api/user/preferences
```
### 🔴 CRITICAL QUESTIONS
6. **Push Notification Provider**
- Option A: Firebase Cloud Messaging (FCM) - all platforms
- Option B: Apple APNS - iOS only
- **Which provider(s)?**
7. **Email Service**
- Option A: SendGrid ($10-20/month)
- Option B: Mailgun ($0.80/1k emails)
- Option C: Self-hosted (free, maintenance)
- **Which service?**
8. **SMS Provider**
- Option A: Twilio ($0.0079/SMS)
- Option B: AWS SNS ($0.00645/SMS)
- Option C: Skip SMS (too expensive)
- **Support SMS? Which provider?**
9. **Monthly Budget**
- What's your monthly budget for SMS/email?
- Expected reminders per day?
### 🟡 IMPORTANT QUESTIONS
10. **Scheduling Precision**
- Is minute-level precision sufficient? (Check every 60s)
- Or need second-level?
11. **Quiet Hours**
- Global per-user or medication-specific?
12. **Caregiver Fallback**
- If user doesn't dismiss, notify caregiver?
- After how long? (30min, 1hr, 2hr?)
13. **Timezone Handling**
- Auto-adjust for Daylight Saving Time?
- Handle traveling users?
---
## 3. Advanced Health Analytics ⭐⭐ MEDIUM
### Overview
AI-powered health insights, trends, anomalies, predictions.
### Database Schema
```javascript
health_analytics_cache: {
user_id: String,
stat_type: String,
period_start: DateTime,
period_end: DateTime,
analytics: {
trend: "increasing" | "decreasing" | "stable",
slope: Number,
r_squared: Number,
average: Number,
min: Number,
max: Number,
std_dev: Number
},
predictions: [{
date: DateTime,
value: Number,
confidence: Number,
lower_bound: Number,
upper_bound: Number
}],
anomalies: [{
date: DateTime,
value: Number,
severity: "low" | "medium" | "high",
deviation_score: Number
}],
insights: [String],
generated_at: DateTime,
expires_at: DateTime
}
```
### API Endpoints
```
GET /api/health-stats/analytics?stat_type=weight&period=30d&include_predictions=true
Response:
{
"analytics": {
"trend": "increasing",
"slope": 0.05,
"r_squared": 0.87,
"average": 75.2
},
"predictions": [
{
"date": "2026-03-14",
"value": 77.5,
"confidence": 0.92
}
],
"anomalies": [...],
"insights": [
"Weight has increased 5% over 30 days"
]
}
GET /api/health-stats/correlations?medication_id=xxx&stat_type=weight
```
### 🟡 IMPORTANT QUESTIONS
14. **Prediction Horizon**
- How many days ahead? (Default: 7)
- Configurable per request?
15. **Anomaly Threshold**
- Z-score threshold? (Default: 2.5)
- Adjustable?
16. **Minimum Data Points**
- Minimum for analytics? (Default: 3)
- Show "insufficient data" below threshold?
17. **Cache Duration**
- How long to cache analytics? (Default: 24hr)
18. **Prediction Confidence**
- Minimum confidence to show predictions? (Default: r² > 0.7)
- Hide low-confidence predictions?
---
## 4. Healthcare Data Export ⭐⭐⭐ MEDIUM
### Overview
Generate PDF reports and CSV exports for providers.
### API Endpoints
```
POST /api/export/medications
{
"format": "pdf" | "csv",
"date_range": { "start": "2026-01-01", "end": "2026-03-31" },
"include_adherence": true
}
GET /api/export/:export_id/download
```
### 🟡 IMPORTANT QUESTIONS
19. **Report Templates**
- Do you have specific template designs?
- Include charts/graphs or just tables?
20. **PDF Generation**
- Server-side (as specified)?
- Or client-side using browser?
21. **Export Limits**
- Max records per export?
- Rate limiting?
22. **Data Retention**
- How long to store export files?
- Auto-delete after download?
---
## 5. Medication Refill Tracking ⭐⭐ LOW
### Overview
Track medication supply and predict refill needs.
### API Endpoints
```
POST /api/medications/:id/refill
{ "quantity": 30, "days_supply": 30 }
GET /api/medications/refills-needed
Response:
{
"refills_needed": [
{
"medication_name": "Metformin",
"days_remaining": 5,
"urgency": "high"
}
]
}
```
### 🟢 NICE-TO-HAVE QUESTIONS
23. **Pharmacy Integration**
- Integrate with pharmacy APIs?
- Or just manual tracking?
24. **Prescription Upload**
- Allow prescription image uploads?
- Storage/privacy requirements?
---
## 6. User Preferences ⭐ LOW
### Overview
User customization settings.
### API Endpoints
```
GET /api/user/preferences
PUT /api/user/preferences
{
"units": "metric" | "imperial",
"timezone": "America/New_York",
"notifications": {
"email": true,
"push": true,
"sms": false
},
"language": "en"
}
```
### 🟢 NICE-TO-HAVE QUESTIONS
25. **Unit Systems**
- Support metric/imperial?
- Per-user or per-stat-type?
26. **Language Support**
- Phase 2.8 or later?
---
## 7. Caregiver Access ⭐⭐ LOW
### Overview
Allow caregivers to view/manage health data.
### API Endpoints
```
POST /api/caregivers/invite
{
"email": "caregiver@example.com",
"permission_level": "view" | "edit" | "full",
"access_duration": "30d"
}
GET /api/caregivers
PUT /api/caregivers/:id/revoke
GET /api/caregivers/:id/activity-log
```
### 🟢 NICE-TO-HAVE QUESTIONS
27. **Permission Levels**
- Which levels? (view, edit, full)
- Granular per-data-type permissions?
28. **Emergency Access**
- Caregiver emergency override?
- How to activate?
---
## 📋 Summary: Questions Requiring Your Input
### 🔴 CRITICAL (Block Implementation)
1. Drug Database: OpenFDA (free) or DrugBank ($500/mo)?
2. Initial Data: Have CSV/JSON of interactions, or build scraper?
3. Ingredient Mapping: Manual or automatic?
4. Severe Interactions: Block creation or just warn?
5. Liability Disclaimers: What wording?
6. Push Provider: Firebase or APNS?
7. Email Service: SendGrid, Mailgun, or self-hosted?
8. SMS Provider: Support? Which one?
9. Monthly Budget: SMS/email budget and expected volume?
### 🟡 IMPORTANT (Affect Design)
10. Scheduling Precision: Minute-level sufficient?
11. Quiet Hours: Global or medication-specific?
12. Caregiver Fallback: After how long?
13. Timezone Handling: Auto DST adjustment?
14. Prediction Horizon: How many days?
15. Anomaly Threshold: What Z-score?
16. Minimum Data: What threshold?
17. Cache Duration: How long?
18. Prediction Confidence: Minimum r²?
19. Report Templates: Have designs?
20. PDF Generation: Server or client-side?
21. Export Limits: Max records?
22. Data Retention: How long?
### 🟢 NICE-TO-HAVE
23. Pharmacy Integration: Yes/no?
24. Prescription Upload: Allow uploads?
25. Unit Systems: Which ones?
26. Language Support: Phase 2.8 or later?
27. Permission Levels: Which levels?
28. Emergency Access: How activate?
---
## 🎯 Recommended Implementation Order
1. **Drug Interaction Checker** (Safety-critical)
2. **Automated Reminder System** (High user value)
3. **Healthcare Data Export** (Provider integration)
4. **Advanced Health Analytics** (Enhanced insights)
5. **Medication Refill Tracking** (Convenience)
6. **User Preferences** (UX)
7. **Caregiver Access** (Family care)
---
## 🚀 Next Steps
1. ✅ Review this document
2. 🔴 Answer CRITICAL questions (1-9)
3. 🟡 Review IMPORTANT questions (10-22)
4. 🟢 Consider NICE-TO-HAVE (23-28)
5. ▶️ Begin implementation
---
*Version: 1.0*
*Status: Awaiting User Input*
*Created: 2026-03-07*

313
docs/implementation/PHASE28_IMPLEMENTATION_SUMMARY.md
View file

@ -1,313 +0,0 @@
# Phase 2.8 Implementation Summary
## Overview
Phase 2.8 implementation is **COMPLETE** and successfully compiled with all features integrated.
## ✅ Implemented Features
### 1. Pill Identification System
**Status**: ✅ Complete
**Files Modified**:
- `backend/src/models/medication.rs`
**Features**:
- `PillSize` enum (Tiny, Small, Medium, Large, ExtraLarge, Custom)
- `PillShape` enum (Round, Oval, Oblong, Capsule, Tablet, etc.)
- `PillColor` enum (White, Blue, Red, Yellow, MultiColored, etc.)
- Optional `pill_identification` field in `Medication` struct
- BSON serialization support
**API Usage**:
```json
{
"name": "Aspirin",
"dosage": "100mg",
"pill_identification": {
"size": "small",
"shape": "round",
"color": "white"
}
}
```
---
### 2. Drug Interaction Checker
**Status**: ✅ Complete
**Files Created**:
- `backend/src/services/mod.rs`
- `backend/src/services/openfda_service.rs`
- `backend/src/services/ingredient_mapper.rs`
- `backend/src/services/interaction_service.rs`
**Files Modified**:
- `backend/src/config/mod.rs` - Added `interaction_service` to AppState
- `backend/src/main.rs` - Initialize interaction service
- `backend/src/handlers/mod.rs` - Export interaction handlers
- `backend/src/handlers/interactions.rs` - API endpoints
**Features**:
- EU-to-US ingredient mapping (e.g., Paracetamol → Acetaminophen)
- Drug interaction severity classification (Mild, Moderate, Severe)
- Known interactions database (warfarin+aspirin, etc.)
- Mandatory disclaimer: "Advisory only, consult with a physician"
- Non-blocking warnings (doesn't prevent medication creation)
**API Endpoints**:
```bash
# Check interactions between medications
POST /api/interactions/check
{
"medications": ["warfarin", "aspirin"]
}
# Check new medication against existing
POST /api/interactions/check-new
{
"new_medication": "ibuprofen",
"existing_medications": ["warfarin", "aspirin"]
}
```
**Response Format**:
```json
{
"interactions": [
{
"drug1": "warfarin",
"drug2": "aspirin",
"severity": "Severe",
"description": "Increased risk of bleeding"
}
],
"has_severe": true,
"disclaimer": "This information is advisory only. Consult with a physician for detailed information about drug interactions."
}
```
---
### 3. OpenFDA Integration
**Status**: ✅ MVP Mode (Hardcoded Database)
**Approach**:
- Uses known interaction pairs for demonstration
- Ready for user-provided CSV/JSON data
- Architecture supports future OpenFDA API integration
**Known Interactions**:
- warfarin + aspirin → Severe (Increased risk of bleeding)
- warfarin + ibuprofen → Severe (Increased risk of bleeding)
- acetaminophen + alcohol → Severe (Increased risk of liver damage)
- ssri + maoi → Severe (Serotonin syndrome risk)
- digoxin + verapamil → Moderate (Increased digoxin levels)
- acei + arb → Moderate (Increased risk of hyperkalemia)
---
## 🔧 Technical Implementation
### Architecture
```
backend/src/
├── services/
│ ├── mod.rs # Module declaration
│ ├── openfda_service.rs # OpenFDA client
│ ├── ingredient_mapper.rs # EU-US mapping
│ └── interaction_service.rs # Orchestrator
├── handlers/
│ ├── interactions.rs # API endpoints
│ └── mod.rs # Export handlers
├── models/
│ └── medication.rs # Pill identification
├── config/
│ └── mod.rs # AppState with interaction_service
└── main.rs # Initialize service
```
### Dependencies Added
```toml
[dependencies]
reqwest = { version = "0.11", features = ["json"] }
serde = { version = "1.0", features = ["derive"] }
```
---
## 📊 Build Status
**Compilation**: ✅ Success (0 errors, 55 warnings)
**Binary Size**: 21 MB
**Build Mode**: Release (optimized)
### Warnings
All warnings are non-critical:
- Unused imports (7)
- Unused variables (3)
- Dead code warnings (45)
---
## 🧪 Testing
### Test Script
Created `backend/test-phase28.sh` with comprehensive tests:
1. ✅ User Registration & Login
2. ✅ Create Medication with Pill Identification
3. ✅ Check Drug Interactions
4. ✅ Check New Medication Against Existing
5. ✅ List Medications with Pill Identification
6. ✅ Verify Disclaimer Included
### Manual Testing Commands
```bash
# Start backend
cd backend
cargo run --release
# In another terminal, run tests
./test-phase28.sh
```
---
## 📝 API Documentation
### POST /api/medications
Create medication with optional pill identification.
```json
{
"name": "Lisinopril",
"dosage": "10mg",
"frequency": "Once daily",
"pill_identification": {
"size": "small",
"shape": "oval",
"color": "blue"
}
}
```
### POST /api/interactions/check
Check interactions between medications.
```json
{
"medications": ["lisinopril", "ibuprofen"]
}
```
### POST /api/interactions/check-new
Check if new medication has interactions with existing.
```json
{
"new_medication": "spironolactone",
"existing_medications": ["lisinopril"]
}
```
---
## 🚀 Deployment
### Local Deployment
```bash
cd backend
cargo build --release
./target/release/normogen-backend
```
### Solaria Deployment
```bash
# Build
cargo build --release
# Deploy
scp backend/target/release/normogen-backend alvaro@solaria:/tmp/
ssh alvaro@solaria 'docker restart normogen-backend'
```
---
## 📋 User Decisions Documented
### OpenFDA vs EMA
- ✅ Use OpenFDA (free)
- ✅ Research EMA API (requires auth - skipped)
- ✅ Manual EU-US ingredient mapping
### Data Sources
- ✅ User will provide CSV/JSON seed data
- ✅ Automatic ingredient lookup (manual mapping)
- ✅ Custom interaction rules supported
### Safety Approach
- ✅ **WARN ONLY** (don't block medication creation)
- ✅ Allow legitimate use cases for interacting medications
- ✅ Include disclaimer: "Advisory only, consult with a physician"
### Reminder System (Future)
- ✅ Firebase Cloud Messaging
- ✅ Mailgun for email
- ✅ Proton Mail for confidential (future)
- ✅ No SMS (skip for MVP)
---
## 🎯 Success Metrics
### Phase 2.8 Goals
| Goal | Status |
|------|--------|
| Pill Identification | ✅ 100% Complete |
| Drug Interaction Checker | ✅ 100% Complete |
| EU-US Ingredient Mapping | ✅ 100% Complete |
| OpenFDA Integration | ✅ MVP Mode (ready for prod data) |
| Disclaimer Included | ✅ 100% Complete |
| API Endpoints Working | ✅ 2/2 Complete |
### Overall Phase 2.8 Progress
**Status**: ✅ **COMPLETE** (100%)
---
## 📦 Deliverables
1. ✅ Updated medication model with pill identification
2. ✅ Drug interaction service (OpenFDA + ingredient mapping)
3. ✅ API endpoints for interaction checking
4. ✅ Comprehensive test suite
5. ✅ API documentation
6. ✅ Implementation summary
---
## 🎉 Summary
Phase 2.8 is **COMPLETE** and ready for production!
**What Works**:
- ✅ Pill identification (size, shape, color)
- ✅ Drug interaction checking
- ✅ EU-US ingredient mapping
- ✅ Non-blocking safety warnings
- ✅ Proper disclaimers
**Next Steps**:
1. Deploy to production
2. Provide drug interaction data (CSV/JSON)
3. Frontend integration
4. Begin Phase 2.9 (Reminder System)
---
**Implementation Date**: March 8, 2025
**Build Status**: ✅ Passing (0 errors)
**Test Coverage**: 6/6 tests
**Production Ready**: ✅ YES

117
docs/implementation/PHASE28_READY_TO_START.md
View file

@ -1,117 +0,0 @@
# Phase 2.8 Complete Technical Specifications Created! 📋
## What I've Created
I have created detailed technical specifications for all 7 Phase 2.8 features with 28 questions organized by priority level.
---
## Documentation Files
1. **PHASE28_COMPLETE_SPECS.md** - Comprehensive technical specifications for all 7 features
2. **PHASE28_PLAN.md** - Original implementation plan
3. **ROADMAP.md** - Development roadmap through Phase 4
---
## Phase 2.8 Features Overview
| Priority | Feature | Est. Duration | Questions |
|----------|---------|---------------|-----------|
| Critical | Drug Interaction Checker | 5-7 days | 5 critical |
| High | Automated Reminder System | 4-5 days | 4 critical + 4 important |
| Medium | Advanced Health Analytics | 4-5 days | 5 important |
| Medium | Healthcare Data Export | 3-4 days | 4 important |
| Low | Medication Refill Tracking | 2-3 days | 2 nice-to-have |
| Low | User Preferences | 2-3 days | 2 nice-to-have |
| Low | Caregiver Access | 3-4 days | 2 nice-to-have |
Total Estimated Duration: 2-3 weeks
---
## YOUR INPUT NEEDED
### CRITICAL Questions (Block Implementation)
1. **Drug Database Source**
- Option A: OpenFDA API (FREE, limited data)
- Option B: DrugBank ($500/month, comprehensive)
- **Which do you prefer?**
2. **Initial Data Set**
- Do you have a CSV/JSON of drug interactions to seed?
- Or should we build a scraper for FDA data?
3. **Medication Name to Ingredients Mapping**
- How should we map medications to ingredients?
- Manual entry or automatic lookup?
4. **Blocking Behavior**
- Should SEVERE interactions BLOCK medication creation?
- Or just show warning requiring acknowledgment?
5. **Liability Disclaimers**
- What disclaimers to show?
- Require "consult provider" confirmation for severe?
6. **Push Notification Provider**
- Option A: Firebase Cloud Messaging (FCM) - all platforms
- Option B: Apple APNS - iOS only
- **Which provider(s)?**
7. **Email Service**
- Option A: SendGrid ($10-20/month)
- Option B: Mailgun ($0.80/1k emails)
- Option C: Self-hosted (free, maintenance)
- **Which service?**
8. **SMS Provider**
- Option A: Twilio ($0.0079/SMS)
- Option B: AWS SNS ($0.00645/SMS)
- Option C: Skip SMS (too expensive)
- **Support SMS? Which provider?**
9. **Monthly Budget**
- What's your monthly budget for SMS/email?
- Expected reminders per day?
---
## Next Steps
1. Review PHASE28_COMPLETE_SPECS.md
2. Answer CRITICAL questions (1-9)
3. Review IMPORTANT questions (10-22)
4. Begin implementation once critical questions answered
---
## Current Project Status
### Phase 2.7: COMPLETE (91%)
- 10 out of 11 tests passing
- 94% endpoint coverage
- Production-ready on Solaria
### Backend Status
- Running: Docker container on port 8001
- Database: MongoDB 6.0 (healthy)
- Framework: Rust + Axum 0.7 + MongoDB
- Test Coverage: 91%
---
## Summary
I have created complete technical specifications for Phase 2.8 including:
- Database schemas for all 7 features
- Rust data models with full type definitions
- API endpoint specifications with request/response examples
- Repository methods for data access
- Background service designs for reminders
- 28 questions organized by priority level
The specs are ready for implementation. Once you answer the 9 critical questions, I can begin building Phase 2.8 features immediately.

325
docs/implementation/PHASE28_REQUIREMENTS_CONFIRMED.md
View file

@ -1,325 +0,0 @@
# Phase 2.8 - Technical Specifications (Updated with User Decisions)
**Status:** Requirements Confirmed - Ready to Implement
**Updated:** 2026-03-07
**Version:** 2.0
---
## ✅ Requirements Confirmed
All **9 critical questions** have been answered. Implementation can proceed.
---
## Confirmed Decisions
### 1. Drug Interaction Checker ⚠️ CRITICAL
#### Requirements
✅ **Database Source**: OpenFDA API (FREE)
✅ **European Alternative**: Research EMA (European Medicines Agency) API
✅ **Initial Data**: User will provide CSV/JSON of drug interactions
✅ **Ingredient Mapping**: Automatic lookup from medication name
✅ **Blocking Behavior**: WARN ONLY (do not block)
✅ **Rationale**: "Many cases where reasons are plenty to allow for dangerous interactions"
✅ **Disclaimer**: "Advisory only, consult with a physician for detailed information"
#### API Integration Points
- OpenFDA Drug Interaction API: https://api.fda.gov/drug/event.json
- EMA API: https://www.ema.europa.eu/en/medicines/human/EPAR (to research)
---
### 2. Automated Reminder System ⭐ HIGH
#### Requirements
✅ **Push Provider**: Firebase Cloud Messaging (FCM)
✅ **Email Service**: Mailgun
✅ **Testing**: Easy testing required
✅ **Privacy**: Proton Mail for confidential emails (future)
✅ **SMS Provider**: Skip SMS for now (cost concerns)
✅ **Budget**: Minimal (proof-of-concept)
#### Implementation Notes
- Use Mailgun's free tier (1000 emails/month free)
- Firebase FCM (free tier available)
- No SMS support in Phase 2.8
- Focus on Push + Email notifications only
---
## 📋 Implementation Plan (Updated)
### Week 1: Core Safety Features (5-7 days)
#### Drug Interaction Checker
- [ ] Set up OpenFDA API integration
- [ ] Research EMA API for European drug data
- [ ] Create database schemas (3 collections)
- [ ] Build repository layer (5 methods)
- [ ] Implement API handlers (3 endpoints)
- [ ] Seed database with provided CSV/JSON
- [ ] Build automatic ingredient lookup
- [ ] Add warning system (non-blocking)
- [ ] Include physician consultation disclaimer
- [ ] Write comprehensive tests
**Estimated Duration**: 5-7 days
---
### Week 2-3: Reminder System (4-5 days)
#### Automated Reminders
- [ ] Set up Firebase Cloud Messaging
- [ ] Set up Mailgun email service
- [ ] Create reminder schemas (3 collections)
- [ ] Build reminder repository
- [ ] Implement background scheduler (60s interval)
- [ ] Create notification service (Push + Email)
- [ ] Build API handlers (6 endpoints)
- [ ] Implement snooze/dismiss functionality
- [ ] Add timezone handling
- [ ] Implement quiet hours
- [ ] Write comprehensive tests
**Estimated Duration**: 4-5 days
---
### Week 4: Remaining Features (5-7 days)
#### Advanced Health Analytics (2-3 days)
- Default parameters for:
- Prediction horizon: 7 days
- Anomaly threshold: Z-score 2.5
- Minimum data points: 3
- Cache duration: 24 hours
- Prediction confidence: r² > 0.7
#### Healthcare Data Export (2 days)
- Server-side PDF generation
- Simple table-based reports
- CSV export for health stats
- Auto-delete after download
#### User Preferences (1 day)
- Metric/imperial units
- Notification preferences
- Timezone settings
#### Caregiver Access (2 days)
- View/Edit/Full permission levels
- Basic invitation system
- Activity logging
**Estimated Duration**: 5-7 days
---
## 🔧 Technical Stack Updates
### External APIs & Services
#### Drug Interaction Data
```toml
[dependencies]
# FDA API integration
reqwest = { version = "0.11", features = ["json"] }
serde_json = "1.0"
# For EMA (European Medicines Agency)
# Research: https://www.ema.europa.eu/en/medicines/human/EPAR
```
#### Firebase Cloud Messaging
```toml
[dependencies]
fcm = "0.9"
```
Environment variables:
```bash
FIREBASE_PROJECT_ID=your-project-id
FIREBASE_SERVICE_ACCOUNT_KEY=path/to/key.json
```
#### Mailgun
```toml
[dependencies]
lettre = "0.11" # Email sending
lettre_email = "0.11"
```
Environment variables:
```bash
MAILGUN_API_KEY=your-api-key
MAILGUN_DOMAIN=your-domain.com
MAILGUN_FROM_EMAIL=noreply@normogen.com
```
### No SMS Support
- SMS skipped for Phase 2.8 (cost concerns)
- Can be added later if budget allows
---
## 📊 Updated Database Collections
### Drug Interactions
```javascript
db.drug_interactions // Drug-drug, drug-allergy interactions
db.medication_ingredients // Ingredient mapping
db.user_allergies // User allergy profiles
```
### Reminders
```javascript
db.reminders // Reminder schedules
db.reminder_logs // Delivery logs
db.reminder_preferences // User settings
```
### Analytics & Export
```javascript
db.health_analytics_cache // Cached analytics
db.medications.correlations // Med-health correlations
db.export_jobs // Export task tracking
```
---
## 🚀 Implementation Order
1. **Drug Interaction Checker** (Week 1)
- Safety-critical feature
- Blocking on other features (should check on med creation)
- OpenFDA + CSV seeding
2. **Automated Reminder System** (Week 2-3)
- High user value
- Firebase + Mailgun setup
- Background scheduler
3. **Advanced Health Analytics** (Week 4)
- Uses default parameters
- Builds on existing health stats
4. **Healthcare Data Export** (Week 4)
- PDF + CSV generation
- Provider integration
5. **User Preferences** (Week 4)
- Simple settings management
6. **Caregiver Access** (Week 4)
- Basic permissions system
---
## 🎯 Success Metrics
### Drug Interaction Checker
- 90%+ coverage of common medications
- <1s response time for interaction checks
- 100% warning rate for severe interactions
### Reminder System
- >95% delivery rate (Push + Email)
- <1min scheduling precision
- 100% quiet hours compliance
### Overall
- 90%+ test coverage
- All features functional
- Production-ready deployment
---
## 📝 Implementation Checklist
### Prerequisites
- [ ] User provides CSV/JSON of drug interactions
- [ ] Set up Firebase project and get service account key
- [ ] Set up Mailgun account and get API key
- [ ] Research EMA API for European drug data
### Phase 2.8.1: Drug Interactions (Week 1)
- [ ] Create `backend/src/models/interactions.rs`
- [ ] Create `backend/src/repositories/interaction_repository.rs`
- [ ] Create `backend/src/handlers/interactions.rs`
- [ ] Implement OpenFDA API client
- [ ] Build automatic ingredient lookup
- [ ] Add routes to main.rs
- [ ] Seed database with provided data
- [ ] Write tests
- [ ] Deploy and test
### Phase 2.8.2: Reminders (Week 2-3)
- [ ] Create `backend/src/models/reminders.rs`
- [ ] Create `backend/src/repositories/reminder_repository.rs`
- [ ] Create `backend/src/services/reminder_scheduler.rs`
- [ ] Create `backend/src/services/notification_service.rs`
- [ ] Create `backend/src/handlers/reminders.rs`
- [ ] Set up Firebase integration
- [ ] Set up Mailgun integration
- [ ] Add background scheduler to main.rs
- [ ] Add routes to main.rs
- [ ] Write tests
- [ ] Deploy and test
### Phase 2.8.3: Analytics & Export (Week 4)
- [ ] Create `backend/src/models/analytics.rs`
- [ ] Create `backend/src/services/analytics_engine.rs`
- [ ] Create `backend/src/handlers/analytics.rs`
- [ ] Create `backend/src/handlers/export.rs`
- [ ] Add routes to main.rs
- [ ] Write tests
- [ ] Deploy and test
### Phase 2.8.4: Final Features (Week 4)
- [ ] Create `backend/src/handlers/preferences.rs`
- [ ] Create `backend/src/handlers/caregivers.rs`
- [ ] Add routes to main.rs
- [ ] Write tests
- [ ] Deploy and test
---
## 📖 Additional Research Needed
### EMA (European Medicines Agency)
- Explore EMA's drug data APIs
- Check for interaction data availability
- Compare with OpenFDA coverage
- Document any limitations
### Privacy-First Email
- Research Proton Mail API availability
- Check integration complexity
- Consider for Phase 2.9 or 3.0
---
## 🎉 Ready to Implement!
All critical requirements confirmed:
- ✅ Drug database source selected (OpenFDA + EMA research)
- ✅ Initial data source confirmed (user-provided CSV/JSON)
- ✅ Ingredient mapping method (automatic)
- ✅ Interaction behavior (warn, don't block)
- ✅ Liability disclaimer wording
- ✅ Push notification provider (Firebase FCM)
- ✅ Email service selected (Mailgun)
- ✅ SMS decision (skip for now)
- ✅ Budget constraints understood (minimal, proof-of-concept)
**Estimated Timeline**: 3 weeks
**Start Date**: Awaiting user to provide interaction CSV/JSON and Firebase/Mailgun credentials
---
*Version: 2.0*
*Status: Requirements Confirmed*
*Updated: 2026-03-07*

37
docs/implementation/PHASE_2.7_COMPILATION_FIX.md
View file

@ -1,37 +0,0 @@
# Phase 2.7 Health Statistics - Compilation Fix Summary
## Issues Fixed
### 1. Simplified Health Stats Handler
- Removed complex trend analysis logic causing compilation errors
- Implemented basic CRUD operations following the working medication handler pattern
- Fixed DateTime serialization issues by using String timestamps
- Removed dependency on missing health_data module
### 2. Simplified Health Stats Model
- Removed complex trait implementations
- Fixed DateTime and Bson serialization issues
- Simplified repository pattern to match working medication implementation
- Removed trend calculation methods that were causing errors
## Current Status
### ✅ Working Features
- **Medication Management**: 7 endpoints deployed and tested (100% pass rate)
- **Health Statistics**: Basic CRUD implementation ready
### 🔄 Compilation Status
- Simplified health stats handler and model created
- Matches proven medication handler pattern
- Ready for deployment and testing
## Next Steps
1. ✅ Verify compilation succeeds
2. 🔄 Deploy to Solaria
3. 🔄 Test health statistics endpoints
4. 🔄 Implement remaining MVP features
---
**Updated:** 2026-03-07 22:38 UTC
**Status:** Fixing compilation errors

103
docs/implementation/PHASE_2.7_COMPILATION_FIX_REPORT.md
View file

@ -1,103 +0,0 @@
# Phase 2.7 Health Statistics - Compilation Fix Report
## ✅ Completed Features
### Medication Management System (100% Complete)
**Status:** Deployed & Tested on Solaria
- ✅ 7 API endpoints fully functional
- ✅ 100% test pass rate (10/10 tests passed)
- ✅ JWT authentication working perfectly
- ✅ MongoDB persistence verified
- ✅ Running on solaria.solivarez.com.ar:8001
**Working Endpoints:**
- POST /api/medications - Create medication
- GET /api/medications - List medications
- GET /api/medications/:id - Get specific medication
- POST /api/medications/:id - Update medication
- DELETE /api/medications/:id - Delete medication
- POST /api/medications/:id/log - Log dose
- GET /api/medications/:id/adherence - Get adherence stats
---
## 🟡 In Progress - Health Statistics Tracking
### Compilation Issues Identified:
1. Complex trait implementations in health_stats model
2. DateTime serialization issues with MongoDB
3. Trend analysis logic causing compilation failures
4. Missing or incorrect imports
### Solution Applied:
- ✅ Simplified handler to match working medication pattern
- ✅ Removed complex DateTime handling, using String timestamps
- ✅ Implemented basic CRUD operations only
- ✅ Removed trend calculation methods
- ✅ Followed proven medication handler structure
### Endpoints Ready (After Fix):
- POST /api/health-stats - Create health statistic
- GET /api/health-stats - List health statistics
- GET /api/health-stats/:id - Get specific statistic
- PUT /api/health-stats/:id - Update statistic
- DELETE /api/health-stats/:id - Delete statistic
---
## 📊 Overall MVP Progress
**Completed:** 1/5 tasks (20%)
**In Progress:** 1/5 tasks (20%)
**Total Progress:** 2/5 (40%)
### Task Breakdown:
1. ✅ **Medication Tracking** - Complete (100%)
2. 🟡 **Health Statistics** - In Progress (70% - fixing compilation)
3. ⚪ **Profile Management** - Not started
4. ⚪ **Notification System** - Not started
5. ✅ **Basic Sharing** - Complete (from Phase 2.6)
---
## 🎯 Next Steps
### Immediate Actions:
1. ✅ Apply simplified health stats code
2. 🔄 Verify compilation succeeds
3. 🔄 Deploy to Solaria
4. 🔄 Run comprehensive API tests
5. 🔄 Document test results
### Remaining MVP Tasks:
- Implement profile management (multi-person family profiles)
- Add notification system (medication reminders)
- Complete health statistics testing
---
## 📝 Technical Notes
### Working Patterns Identified:
- Medication handler serves as proven reference implementation
- JWT authentication middleware functioning correctly
- MongoDB collection operations reliable with simple types
- Audit logging system operational
### Compilation Challenges Solved:
- Simplified complex trait implementations
- Fixed DateTime serialization by using String timestamps
- Removed trend analysis logic that was overcomplicated for MVP
- Matched working medication handler pattern exactly
### Key Learnings:
- Keep MVP simple - defer advanced features
- Follow proven patterns rather than reinventing
- Use String timestamps instead of complex DateTime handling
- Basic CRUD functionality sufficient for MVP
---
**Updated:** 2026-03-07 22:39 UTC
**Phase:** 2.7 MVP Development
**Status:** Fixing health stats compilation errors
**Success Rate:** Medication 100%, Health Stats 70% (fixing)

31
docs/implementation/PHASE_2.7_COMPILATION_STATUS.md
View file

@ -1,31 +0,0 @@
# Phase 2.7 - Compilation Error Fix
## Current Status
### ✅ Working Features
- **Medication Management**: 7 endpoints, 100% test pass rate
- **Authentication**: JWT middleware functioning correctly
- **Database**: MongoDB connection and operations working
### 🔧 Fixing: Health Statistics Compilation Errors
## Issues Identified
1. Complex trait implementations in health_stats model
2. DateTime serialization issues with MongoDB
3. Trend analysis logic causing compilation failures
## Solution Strategy
- Simplify health_stats handler to match working medication pattern
- Remove complex DateTime handling, use String timestamps
- Implement basic CRUD operations only
- Defer advanced features to post-MVP
## Next Steps
1. Fix compilation errors in health_stats
2. Deploy to Solaria
3. Test endpoints
4. Continue with remaining MVP features
---
**Updated:** 2026-03-07 22:38 UTC
**Status:** Fixing compilation errors

102
docs/implementation/PHASE_2.7_CURRENT_STATUS.md
View file

@ -1,102 +0,0 @@
# Phase 2.7 MVP - Current Status Report
## ✅ Completed Features
### 1. Medication Management System (100% Complete)
**Status:** Deployed & Tested on Solaria
- ✅ 7 API endpoints fully functional
- ✅ 100% test pass rate (10/10 tests passed)
- ✅ JWT authentication working
- ✅ MongoDB persistence verified
- ✅ Running on solaria.solivarez.com.ar:8001
**Endpoints:**
- POST /api/medications - Create medication
- GET /api/medications - List medications
- GET /api/medications/:id - Get specific medication
- POST /api/medications/:id - Update medication
- DELETE /api/medications/:id - Delete medication
- POST /api/medications/:id/log - Log dose
- GET /api/medications/:id/adherence - Get adherence stats
---
## 🟡 In Progress - Health Statistics Tracking
### Current Issues:
- Compilation errors in health_stats handler
- Complex trend analysis logic causing failures
- Missing trait implementations
### Solution Applied:
- Simplified handler to match working medication pattern
- Removed complex DateTime serialization issues
- Implemented basic CRUD operations
- Created straightforward repository pattern
### Endpoints Ready (Pending Fix):
- POST /api/health-stats - Create health statistic
- GET /api/health-stats - List health statistics
- GET /api/health-stats/:id - Get specific statistic
- PUT /api/health-stats/:id - Update statistic
- DELETE /api/health-stats/:id - Delete statistic
---
## 📊 Overall MVP Progress
**Completed:** 1/5 tasks (20%)
**In Progress:** 1/5 tasks (20%)
**Total Progress:** 2/5 (40%)
### Task Breakdown:
1. ✅ **Medication Tracking** - Complete (100%)
2. 🟡 **Health Statistics** - In Progress (70% - fixing compilation)
3. ⚪ **Profile Management** - Not started
4. ⚪ **Notification System** - Not started
5. ✅ **Basic Sharing** - Complete (from Phase 2.6)
---
## 🎯 Next Immediate Steps
1. **Fix Compilation Errors** (Current)
- Verify simplified health stats code compiles
- Test health stats endpoints locally
- Deploy to Solaria
2. **Deploy & Test**
- Update Docker containers
- Run comprehensive API tests
- Document test results
3. **Continue MVP Development**
- Implement profile management
- Add notification system
- Complete remaining features
---
## 📝 Technical Notes
### Working Patterns:
- Medication handler serves as reference implementation
- JWT authentication middleware functioning correctly
- MongoDB collection operations proven reliable
- Audit logging system operational
### Compilation Challenges:
- Complex trait implementations causing errors
- DateTime serialization issues with MongoDB
- Trend analysis logic overcomplicated for MVP
### Solution Strategy:
- Simplify to proven patterns
- Focus on core CRUD functionality
- Defer advanced features to post-MVP
- Follow medication handler success pattern
---
**Updated:** 2026-03-07 22:38 UTC
**Phase:** 2.7 MVP Development
**Status:** Fixing health stats compilation errors

77
docs/implementation/PHASE_2.7_PROGRESS_SUMMARY.md
View file

@ -1,77 +0,0 @@
# Phase 2.7 MVP - Progress Summary
**Date:** 2026-03-07 16:31
**Status:** 🟡 IN PROGRESS
---
## ✅ COMPLETED TASKS
### Task 1: Medication Management System (100% Complete)
**Status:** ✅ DEPLOYED & TESTED ON SOLARIA
All 7 API endpoints fully functional with 100% test pass rate.
**Endpoints:**
- POST /api/medications - Create medication
- GET /api/medications - List medications
- GET /api/medications/:id - Get specific medication
- POST /api/medications/:id - Update medication
- POST /api/medications/:id/delete - Delete medication
- POST /api/medications/:id/log - Log dose
- GET /api/medications/:id/adherence - Get adherence stats
**Deployment:** Running on Solaria (solaria.solivarez.com.ar:8001)
---
## 🟡 IN PROGRESS TASKS
### Task 2: Health Statistics Tracking (70% Complete)
**Status:** 🟡 FIXING COMPILATION ERRORS
**What's Done:**
- ✅ Database models created
- ✅ Repository structure implemented
- ✅ Handlers created for all CRUD operations
- ✅ Main router updated with health stats routes
**Current Issues:**
- 🔧 Fixing compilation errors in handlers
- 🔧 Removing health_data dependency
- 🔧 Testing endpoints
**Endpoints Ready:**
- POST /api/health-stats - Create health statistic
- GET /api/health-stats - List health statistics
- GET /api/health-stats/:id - Get specific statistic
- PUT /api/health-stats/:id - Update statistic
- DELETE /api/health-stats/:id - Delete statistic
- GET /api/health-stats/trends - Get health trends
---
## 📊 OVERALL PROGRESS
**Completed Tasks:** 1/5 (20%)
**In Progress:** 1/5 (20%)
**Total Progress:** 2/5 (40%)
---
## 🎯 NEXT STEPS
1. **Immediate:** Fix health stats compilation errors
2. **Deploy:** Deploy health stats to Solaria
3. **Test:** Run comprehensive health stats tests
4. **Next Task:** Profile Management (multi-person family profiles)
5. **Final Task:** Notification System (medication reminders)
---
## 🚀 DEPLOYMENT STATUS
**Medication Management:** ✅ Production-ready on Solaria
**Health Statistics:** 🟡 Development (fixing errors)
**Profile Management:** ⚪ Not started
**Notification System:** ⚪ Not started

128
docs/implementation/README.md
View file

@ -1,107 +1,61 @@
# Implementation Documentation
This section contains phase-by-phase implementation plans, specifications, progress reports, and completion summaries.
Phase-by-phase implementation completion records. Each phase that's been built
has a canonical completion note here; original plans and specs are in
[../archive/](../archive/README.md).
## 📋 Organization
## By Phase
### By Phase
#### Phase 2.3 - JWT Authentication ✅
### Phase 2.3 — JWT Authentication ✅
- [PHASE-2-3-COMPLETION-REPORT.md](./PHASE-2-3-COMPLETION-REPORT.md)
- [PHASE-2-3-SUMMARY.md](./PHASE-2-3-SUMMARY.md)
#### Phase 2.4 - User Management ✅
- [PHASE-2-4-COMPLETE.md](./PHASE-2-4-COMPLETE.md)
### Phase 2.4 — User Management ✅
- (completion notes folded into [../product/STATUS.md](../product/STATUS.md))
#### Phase 2.5 - Access Control ✅
### Phase 2.5 — Access Control ✅
- [PHASE-2-5-COMPLETE.md](./PHASE-2-5-COMPLETE.md)
- [PHASE-2-5-FILES.txt](./PHASE-2-5-FILES.txt)
- [PHASE-2-5-GIT-STATUS.md](./PHASE-2-5-GIT-STATUS.md)
- [PHASE-2-5-STATUS.md](./PHASE-2-5-STATUS.md)
#### Phase 2.6 - Security Hardening ✅
### Phase 2.6 — Security Hardening ✅
- [PHASE_2.6_COMPLETION.md](./PHASE_2.6_COMPLETION.md)
#### Phase 2.7 - Health Data Features 🚧 (91% Complete)
**Planning & Specs**
- [PHASE_2.7_PLAN.md](./PHASE_2.7_PLAN.md) - Detailed implementation plan
- [PHASE_2.7_MVP_PRIORITIZED_PLAN.md](./PHASE_2.7_MVP_PRIORITIZED_PLAN.md) - MVP features prioritized
- [PHASE_2.7_DEPLOYMENT_PLAN.md](./PHASE_2.7_DEPLOYMENT_PLAN.md) - Deployment strategy
### Phase 2.7 — Health Data Features ✅
- [PHASE27_COMPLETION_REPORT.md](./PHASE27_COMPLETION_REPORT.md) - Completion report
- [MVP_PHASE_2.7_SUMMARY.md](./MVP_PHASE_2.7_SUMMARY.md) - MVP prioritization
- [MEDICATION_MANAGEMENT_IMPLEMENTATION_SUMMARY.md](./MEDICATION_MANAGEMENT_IMPLEMENTATION_SUMMARY.md) - Medication CRUD
- Original plans: [../archive/](../archive/README.md)
**Progress & Status**
- [PHASE_2.7_PROGRESS_SUMMARY.md](./PHASE_2.7_PROGRESS_SUMMARY.md) - Progress tracking
- [PHASE27_STATUS.md](./PHASE27_STATUS.md) - Current status
- [PHASE_2.7_CURRENT_STATUS.md](./PHASE_2.7_CURRENT_STATUS.md) - Status update
- [MVP_PHASE_2.7_SUMMARY.md](./MVP_PHASE_2.7_SUMMARY.md) - MVP summary
### Phase 2.8 — Drug Interactions ✅
- [PHASE28_FINAL_STATUS.md](./PHASE28_FINAL_STATUS.md) - Completion (interactions live)
- Original plan + specs: [../archive/](../archive/README.md)
**Medication Management**
- [MEDICATION_IMPLEMENTATION_SUMMARY.md](./MEDICATION_IMPLEMENTATION_SUMMARY.md)
- [MEDICATION_MANAGEMENT_COMPLETE.md](./MEDICATION_MANAGEMENT_COMPLETE.md)
- [MEDICATION_MANAGEMENT_IMPLEMENTATION_SUMMARY.md](./MEDICATION_MANAGEMENT_IMPLEMENTATION_SUMMARY.md)
- [MEDICATION_MANAGEMENT_STATUS.md](./MEDICATION_MANAGEMENT_STATUS.md)
### Frontend 🚧
- [FRONTEND_STATUS.md](./FRONTEND_STATUS.md) - Current frontend status
**Completion Reports**
- [PHASE27_COMPLETION_REPORT.md](./PHASE27_COMPLETION_REPORT.md)
- [PHASE27_FINAL_RESULTS.md](./PHASE27_FINAL_RESULTS.md)
## Implementation Progress
**Fixes & Issues**
- [PHASE_2.7_COMPILATION_FIX.md](./PHASE_2.7_COMPILATION_FIX.md)
- [PHASE_2.7_COMPILATION_FIX_REPORT.md](./PHASE_2.7_COMPILATION_FIX_REPORT.md)
- [PHASE_2.7_COMPILATION_STATUS.md](./PHASE_2.7_COMPILATION_STATUS.md)
| Phase | Status |
|-------|--------|
| 2.3 | ✅ Implemented |
| 2.4 | ✅ Implemented |
| 2.5 | ✅ Implemented |
| 2.6 | ✅ Implemented |
| 2.7 | ✅ Implemented |
| 2.8 | ✅ Implemented (drug interactions) |
| P0/P1 Security + Tests | ✅ Implemented |
| Frontend (Phase 3) | 🚧 Early |
#### Phase 2.8 - Drug Interactions & Advanced Features 📋 Planning
**Specifications**
- [PHASE28_PLAN.md](./PHASE28_PLAN.md) - Implementation plan
- [PHASE28_COMPLETE_SPECS.md](./PHASE28_COMPLETE_SPECS.md) - Complete specifications
- [PHASE28_COMPLETE_SPECS_V1.md](./PHASE28_COMPLETE_SPECS_V1.md) - Specifications v1
- [PHASE28_PILL_IDENTIFICATION.md](./PHASE28_PILL_IDENTIFICATION.md) - Pill identification feature
## Key Features Implemented
**Progress & Status**
- [PHASE28_IMPLEMENTATION_SUMMARY.md](./PHASE28_IMPLEMENTATION_SUMMARY.md) - Implementation summary
- [PHASE28_FINAL_STATUS.md](./PHASE28_FINAL_STATUS.md) - Final status
- [PHASE28_REQUIREMENTS_CONFIRMED.md](./PHASE28_REQUIREMENTS_CONFIRMED.md) - Confirmed requirements
- [PHASE28_READY_TO_START.md](./PHASE28_READY_TO_START.md) - Ready to start checklist
### Frontend Implementation
- [FRONTEND_INTEGRATION_PLAN.md](./FRONTEND_INTEGRATION_PLAN.md) - Frontend integration strategy
- [FRONTEND_PROGRESS_REPORT.md](./FRONTEND_PROGRESS_REPORT.md) - Frontend development progress
- [FRONTEND_STATUS.md](./FRONTEND_STATUS.md) - Frontend current status
## 📊 Implementation Progress
| Phase | Status | Completion |
|-------|--------|------------|
| 2.3 | ✅ Complete | 100% |
| 2.4 | ✅ Complete | 100% |
| 2.5 | ✅ Complete | 100% |
| 2.6 | ✅ Complete | 100% |
| 2.7 | 🚧 In Progress | 91% |
| 2.8 | 📋 Planned | 0% |
| Frontend | 🚧 In Progress | 10% |
## 🎯 Key Features Implemented
### ✅ Completed
- JWT Authentication with token rotation
- User management (profiles, settings)
- Permission-based access control
- Share management system
- Security hardening (rate limiting, audit logging)
- Session management
- Medication management
- Health statistics tracking
### 🚧 In Progress
- Medication adherence tracking
- Lab results management
### 📋 Planned (Phase 2.8)
- Drug interaction checking
- Automated reminders
- Advanced health analytics
- Medication refill tracking
- Caregiver access
- JWT authentication with token rotation + `token_version` invalidation
- User management (profiles, settings, password change/recovery)
- Permission-based access control + share management
- Security hardening (audit logging, account lockout, session management)
- Medication management (CRUD, dose logging, adherence)
- Health statistics tracking + trends
- Drug interaction checking (OpenFDA-based ingredient mapping)
- Refresh-token persistence (hashed, revocable) + `/refresh` and `/logout`
- Fail-fast production config + real client-IP audit logging
---
*Last Updated: 2026-03-09*
*Last Updated: 2026-06-27*

175
docs/product/PROGRESS.md
View file

@ -1,21 +1,22 @@
# Development Progress Dashboard
**Last Updated**: 2026-03-09 10:43:00 UTC
**Last Updated**: 2026-06-27
> This dashboard uses qualitative status (Implemented / In Progress / Planned)
> rather than percentage estimates. For the authoritative breakdown see
> [STATUS.md](./STATUS.md).
---
## 📊 Overall Progress
## 📊 Overall Status
```
████████████████████████████████████████████░░░░░░░░ 75% Complete
```
| Component | Progress | Status | Updated |
|-----------|----------|--------|---------|
| **Backend** | ████████████████████████████████████░░ 91% | 🚧 Active | 2026-03-08 |
| **Frontend** | █████░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░ 10% | 🚧 Early | 2026-03-01 |
| **Testing** | ████████████████████████████████░░░░░ 85% | ✅ Good | 2026-03-08 |
| **Deployment** | ████████████████████████████████████ 100% | ✅ Ready | 2026-02-20 |
| Area | Status |
|------|--------|
| **Backend** | ✅ Phase 2.x feature-complete (through drug interactions); deployed on Solaria. |
| **Security** | ✅ Hardening pass complete (token-version validation, hashed refresh tokens, fail-fast config, real-IP audit). |
| **Tests** | ✅ 18 unit + 13 integration (auth + medication), CI-gated with MongoDB. |
| **Frontend** | 🚧 Early — Login/Register + API/store layer; router not yet wired. |
| **Deployment** | 🚧 Operational on Solaria; Docker image built manually (not in CI). |
---
@ -39,19 +40,13 @@
---
### Phase 2: Backend Development 🚧 91%
```
█████████████████████████████████████████████░░░░░ 91%
```
### Phase 2: Backend Development ✅ IMPLEMENTED
**Started**: 2025-Q4
**Estimated Completion**: 2026-03-31
**Current Phase**: 2.8 - Drug Interactions
**Started**: 2025-Q4
**Status**: All planned 2.x phases implemented (including drug interactions).
**Open follow-ups**: rate limiting (stub), reminders/analytics/export (Phase 2.8 stretch items), frontend.
#### Phase 2.1-2.5 ✅ 100%
```
██████████████████████████████████████████████████ 100%
```
#### Phase 2.1-2.5 ✅ Implemented
**Completed**: 2026-02-15
@ -62,22 +57,16 @@
- [x] Permission-based access control
- [x] Share management
#### Phase 2.6 ✅ 100%
```
██████████████████████████████████████████████████ 100%
```
#### Phase 2.6 ✅ Implemented
**Completed**: 2026-02-20
- [x] Rate limiting
- [x] Account lockout policies
- [x] Security audit logging
- [x] Session management
- [ ] Rate limiting (middleware is a stub — deferred)
#### Phase 2.7 🚧 91%
```
█████████████████████████████████████████████░░░░░ 91%
```
#### Phase 2.7 ✅ Implemented
**Completed**: 2026-03-08
@ -86,23 +75,21 @@
- [x] Health statistics tracking
- [x] Lab results storage
- [x] OpenFDA integration
- [x] Comprehensive testing
- [ ] Full integration testing (9%)
#### Phase 2.8 📋 0%
```
░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░░ 0%
```
#### Phase 2.8 ✅ Implemented (core)
**Planned**: 2026-03-10 to 2026-03-31 (2-3 weeks)
- [x] Drug interaction checking (`/api/interactions/check`, `/check-new`)
- [ ] Automated reminder system *(not started)*
- [ ] Advanced health analytics *(not started)*
- [ ] Healthcare data export (FHIR, HL7) *(not started)*
- [ ] Medication refill tracking *(not started)*
- [ ] Caregiver access *(not started)*
- [ ] Drug interaction checking
- [ ] Automated reminder system
- [ ] Advanced health analytics
- [ ] Healthcare data export (FHIR, HL7)
- [ ] Medication refill tracking
- [ ] User preferences
- [ ] Caregiver access
#### P0/P1 Security + Tests ✅ Implemented
- [x] token_version validation, hashed refresh-token persistence, `/refresh` + `/logout`
- [x] Fail-fast config (`APP_ENVIRONMENT`), real client-IP audit
- [x] Handler `.unwrap()` cleanup; integration tests rewritten against a test DB
---
@ -221,10 +208,9 @@
- [x] Revoke session
- [x] Revoke all sessions
### Drug Interactions 📋 0%
- [ ] Check interactions
- [ ] Check new medication
- [ ] Get interaction details
### Drug Interactions ✅ Implemented
- [x] Check interactions (`POST /api/interactions/check`)
- [x] Check new medication (`POST /api/interactions/check-new`)
---
@ -232,61 +218,59 @@
| Handler | Status | Endpoints | Coverage |
|---------|--------|-----------|----------|
| **auth** | ✅ Complete | 5 | 100% |
| **users** | ✅ Complete | 6 | 100% |
| **medications** | ✅ Complete | 7 | 100% |
| **health_stats** | ✅ Complete | 6 | 100% |
| **lab_results** | ✅ Complete | 6 | 100% |
| **shares** | ✅ Complete | 4 | 100% |
| **permissions** | ✅ Complete | 1 | 100% |
| **sessions** | ✅ Complete | 3 | 100% |
| **interactions** | 📋 Planned | 2 | 0% |
| **health** | ✅ Complete | 1 | 100% |
| **auth** | ✅ Complete | 6 (incl. refresh, logout) | implemented |
| **users** | ✅ Complete | 6 | implemented |
| **medications** | ✅ Complete | 7 | implemented |
| **health_stats** | ✅ Complete | 6 | implemented |
| **lab_results** | ✅ Complete | 6 | implemented |
| **shares** | ✅ Complete | 4 | implemented |
| **permissions** | ✅ Complete | 1 | implemented |
| **sessions** | ✅ Complete | 3 | implemented |
| **interactions** | ✅ Complete | 2 | implemented |
| **health** | ✅ Complete | 1 | implemented |
**Total**: 41 endpoints implemented, 2 planned
**Total**: 41 endpoints implemented.
---
## Test Coverage
### Backend Tests
- **Unit tests**: 90% coverage
- **Integration tests**: 85% coverage
- **API endpoint tests**: 95% coverage
- **Security tests**: 80% coverage
- **Unit tests**: 18 tests (`cargo test --lib`) — client-IP, JWT, refresh hashing, token-version cache, services.
- **Integration tests**: 13 tests (`cargo test --test auth_tests --test medication_tests`) — in-process against an isolated test DB; cover auth, refresh rotation, logout, password-change invalidation, medication CRUD.
### Frontend Tests
- **Unit tests**: 20% coverage (early stage)
- **Integration tests**: 0% (not started)
- **E2E tests**: 0% (planned)
- Not started (frontend itself is early stage).
---
## Milestones
### ✅ Completed
1. ✅ **Milestone 1**: Foundation (2025-Q4)
2. ✅ **Milestone 2**: Core Features (2026-02-15)
3. ✅ **Milestone 3**: Security Hardening (2026-02-20)
4. ✅ **Milestone 4**: Health Data Features (2026-03-08, 91%)
1. ✅ Foundation (2025-Q4)
2. ✅ Core Features — Phases 2.1–2.5 (2026-02-15)
3. ✅ Security Hardening — Phase 2.6 (2026-02-20)
4. ✅ Health Data Features — Phase 2.7 (2026-03-08)
5. ✅ Drug Interactions — Phase 2.8 (core)
6. ✅ P0/P1 Security + Test rewrite
### 🎯 Up Next
5. 📋 **Milestone 5**: Drug Interactions & Advanced Features (2026-03-31)
### 🚧 Up Next
7. 🚧 **Phase 3 — Frontend**: wire router, build dashboard + feature UIs.
### 🔮 Future
6. 🔮 **Milestone 6**: Frontend Complete (2026-Q3)
7. 🔮 **Milestone 7**: Mobile Apps (2026-Q4)
8. 🔮 **Milestone 8**: AI/ML Features (2027)
8. 🔮 Phase 2.8 stretch: reminders, analytics, export, caregiver access.
9. 🔮 Phase 4 — Mobile apps.
10. 🔮 Phase 5 — Integrations, AI/ML.
---
## Timeline Visualization
```
2025-Q4 2026-02 2026-03 2026-Q2 2026-Q3 2027
2025-Q4 2026-02 2026-03 2026-06 next later
├──────────┼──────────┼──────────┼──────────┼──────────┼──
Phase 1 2.1-2.5 2.6-2.7 2.8 Phase 3 Phase 4
(100%) (100%) (91%) (0%) (0%) (0%)
Phase 1 2.1-2.5 2.6-2.7 2.8 + Phase 3 Phase 4/5
+P0/P1 security frontend
```
---
@ -300,7 +284,8 @@ tokio = "1.41.1"
mongodb = "2.8.2"
jsonwebtoken = "9.3.1"
reqwest = "0.12.28"
tower-governor = "0.4.3"
pbkdf2 = "0.12.2"
sha2 = "0.10" # refresh-token hashing
```
### Frontend (TypeScript/React)
@ -319,26 +304,20 @@ tower-governor = "0.4.3"
## Next Steps
### Immediate (This Week)
1. ✅ Update STATUS.md with current progress
2. ✅ Align ROADMAP.md with STATUS
3. ✅ Expand README.md with quick start
4. 📋 Start Phase 2.8 implementation
### Immediate
1. 🚧 **Phase 3 — Frontend**: wire the React Router, build the dashboard and feature UIs.
2. 📋 Rate limiting (the middleware is currently a stub).
3. 📋 Env-var/port convention cleanup across `.env` / docker-compose / config loader.
### Short-term (This Month)
5. 📋 Implement drug interaction checking
6. 📋 Build automated reminder system
7. 📋 Create advanced health analytics
8. 📋 Add healthcare data export
### Short-term
4. 📋 Phase 2.8 stretch: automated reminders, advanced analytics, data export.
5. 📋 Docker image build automation (currently manual — CI can't run DinD).
### Medium-term (Next Quarter)
9. 🔮 Complete Phase 2.8
10. 🔮 Begin Phase 3 (Frontend)
11. 🔮 Build dashboard UI
12. 🔮 Implement data visualization
### Medium-term
6. 🔮 Complete Phase 3 (frontend).
7. 🔮 Begin Phase 4 (mobile).
---
**Last Updated**: 2026-03-09 10:43:00 UTC
**Next Review**: After Phase 2.8 completion
**Last Updated**: 2026-06-27
**Maintained By**: Project maintainers

38
docs/product/README.md
View file

@ -28,7 +28,7 @@ The backend API will be available at `http://localhost:8000`
### For Developers
#### 1. Prerequisites
- **Backend**: Rust 1.93+, Docker
- **Backend**: Rust (edition 2021 toolchain), Docker
- **Frontend**: Node.js 18+, npm
#### 2. Backend Development
@ -57,10 +57,10 @@ npm test # Run tests
## 📊 Current Status
**Phase**: 2.8 - Drug Interactions & Advanced Features (Planning)
**Backend**: 91% complete
**Frontend**: 10% complete
**Deployment**: Docker on Solaria (production-ready)
**Backend**: ✅ Phase 2.x feature-complete (through drug interactions); security-hardened; deployed on Solaria.
**Frontend**: 🚧 Early (Login/Register + API/store layer; router not yet wired).
**Deployment**: Docker on Solaria (image built manually — not in CI).
**Tests**: 18 unit + 13 integration (auth + medication), CI-gated with MongoDB.
See [STATUS.md](./STATUS.md) for detailed progress tracking.
@ -76,7 +76,7 @@ This file - Product documentation overview and quick start.
#### [STATUS.md](./STATUS.md)
**Current project status and progress tracking**
- Overall progress (Backend 91%, Frontend 10%)
- Overall status (Backend feature-complete through Phase 2.8; Frontend early stage)
- Phase-by-phase completion status
- Recently completed features
- Next milestones
@ -135,14 +135,14 @@ This file - Product documentation overview and quick start.
### Project Overview
- **Name**: Normogen (Balanced Life in Mapudungun)
- **Goal**: Open-source health data platform for private, secure health data management
- **Current Phase**: 2.8 - Drug Interactions & Advanced Features
- **Backend**: Rust + Axum + MongoDB (91% complete)
- **Frontend**: React + TypeScript + Material-UI (10% complete)
- **Current Phase**: 2.8 (drug interactions) implemented; open work is the frontend (Phase 3)
- **Backend**: Rust + Axum + MongoDB (Phase 2.x feature-complete, security-hardened)
- **Frontend**: React + TypeScript + Material-UI (early stage — Login/Register + API/store layer)
### Technology Stack
**Backend**:
- Rust 1.93, Axum 0.7
- Rust (edition 2021), Axum 0.7
- MongoDB 7.0
- JWT authentication (15min access, 30day refresh)
- PBKDF2 password hashing (100K iterations)
@ -284,19 +284,18 @@ cd web/normogen-web && npm test
## 📈 Project Progress
### Backend: 91% Complete ✅
- ✅ Authentication & authorization
### Backend: Phase 2.x feature-complete ✅
- ✅ Authentication & authorization (JWT, refresh-token rotation, token_version invalidation)
- ✅ User management
- ✅ Medication management
- ✅ Health statistics
- ✅ Lab results
- ✅ Security features
- 🚧 Drug interactions (Phase 2.8)
- ✅ Security features (audit logging, account lockout, fail-fast config, real-IP audit)
- ✅ Drug interactions (Phase 2.8)
### Frontend: 10% Complete 🚧
- 🚧 Basic React structure
- 🚧 Login/register pages
- 📋 Dashboard (planned)
### Frontend: Early stage 🚧
- 🚧 Login/register pages + API/store layer
- 📋 Router wiring, dashboard (planned)
- 📋 Medication UI (planned)
See [STATUS.md](./STATUS.md) for detailed progress.
@ -305,8 +304,7 @@ See [STATUS.md](./STATUS.md) for detailed progress.
## 🗺️ Roadmap
### Phase 2.8 (Current - Planning)
- Drug interaction checking
### Phase 2.8 follow-ups (not started)
- Automated reminders
- Advanced analytics
- Data export (FHIR, HL7)

104
docs/product/ROADMAP.md
View file

@ -14,9 +14,9 @@
---
## Phase 2: Core Backend Development 🚧 91% COMPLETE
## Phase 2: Core Backend Development ✅ IMPLEMENTED
### Phase 2.1-2.5 ✅ COMPLETE (100%)
### Phase 2.1-2.5 ✅ IMPLEMENTED
**Timeline**: 2025-Q4 to 2026-02-15
#### Completed Features
@ -30,19 +30,21 @@
---
### Phase 2.6 ✅ COMPLETE (100%)
### Phase 2.6 ✅ IMPLEMENTED
**Timeline**: Completed 2026-02-20
#### Completed Features
- ✅ Enhanced security
- ✅ Audit logging
- ✅ Rate limiting (tower-governor)
- ✅ Session management (list, revoke)
- ✅ Account lockout policies
#### Still Open
- 📋 Rate limiting (middleware is a stub — deferred)
---
### Phase 2.7 🚧 91% COMPLETE
### Phase 2.7 ✅ IMPLEMENTED
**Timeline**: Started 2026-02-20, Completed 2026-03-08
#### Completed Features ✅
@ -51,22 +53,16 @@
- ✅ Health statistics tracking (weight, BP, etc.)
- ✅ Lab results storage
- ✅ OpenFDA integration for drug data
- ✅ Comprehensive test coverage
#### In Progress 🚧
- 🚧 Full integration testing
- 🚧 Documentation updates
#### Moved to Phase 2.8 📋
- 📋 Drug interaction checking (will use new interactions handler)
---
### Phase 2.8 🎯 IN PLANNING
**Timeline**: Estimated 2-3 weeks (Starting 2026-03-10)
### Phase 2.8 ✅ IMPLEMENTED (core)
**Timeline**: Drug interaction checking implemented.
#### Planned Features
- ⚠️ **Drug interaction checking** - Check interactions between medications
#### Implemented ✅
- ✅ **Drug interaction checking** - `/api/interactions/check` + `/check-new`, ingredient mapper, interaction service
#### Not Yet Started (stretch)
- 🔔 **Automated reminder system** - Medication and appointment reminders
- 📊 **Advanced health analytics** - Trend analysis and insights
- 📄 **Healthcare data export** - Export to FHIR, HL7 formats
@ -74,8 +70,12 @@
- ⚙️ **User preferences** - Notification settings, display preferences
- 👥 **Caregiver access** - Grant limited access to caregivers
**Estimated Duration**: 2-3 weeks
**Prerequisites**: Phase 2.7 completion (91% done)
---
### P0/P1 Security + Tests ✅ IMPLEMENTED
- ✅ token_version validation, hashed refresh-token persistence, `/refresh` + `/logout`
- ✅ Fail-fast config (`APP_ENVIRONMENT`), real client-IP audit logging
- ✅ Handler `.unwrap()` cleanup; integration tests rewritten against a test DB
---
@ -199,34 +199,32 @@
## Current Status
**Active Phase**: Phase 2.8 - Drug Interactions & Advanced Features
**Progress**: 91% (Phase 2), 10% (Phase 3)
**Backend**: Production-ready for most features
**Frontend**: Early development stage
**Database**: MongoDB 7.0
**Deployment**: Docker on Solaria
**Test Coverage**: 85%
**Backend**: Phase 2.x feature-complete (through drug interactions); security-hardened; deployed on Solaria.
**Frontend**: Early stage (Login/Register + API/store layer; router not yet wired).
**Database**: MongoDB 7.0
**Deployment**: Docker on Solaria (image built manually — not in CI).
**Tests**: 18 unit + 13 integration (auth + medication), CI-gated with MongoDB.
---
## Technology Stack
### Backend ✅
- **Language**: Rust 1.93
- **Language**: Rust (edition 2021)
- **Framework**: Axum 0.7 (async web framework)
- **Database**: MongoDB 7.0
- **Authentication**: JWT (15min access, 30day refresh)
- **Security**: PBKDF2 (100K iterations), rate limiting
- **Deployment**: Docker, Docker Compose
- **CI/CD**: Forgejo Actions
- **Authentication**: JWT — access (default 15 min) + hashed/rotated refresh tokens (default 7 days, persisted in Mongo)
- **Security**: PBKDF2 (100K iterations); `token_version` invalidation; account lockout; audit logging with real client-IP resolution
- **Deployment**: Docker, Docker Compose (image built manually)
- **CI/CD**: Forgejo Actions (format / clippy / build / test)
### Frontend 🔮
- **Framework**: React 19.2.4 + TypeScript 4.9.5
### Frontend 🚧
- **Framework**: React 19.2.4 + TypeScript 4.9.5 (Create React App)
- **UI Library**: Material-UI (MUI) 7.3.9
- **State Management**: Zustand 5.0.11
- **HTTP Client**: Axios 1.13.6
- **Charts**: Recharts 3.8.0, MUI X-Charts 8.27.4
- **Status**: 10% complete
- **Status**: Early — Login/Register + API/store layer; router not yet wired.
---
@ -234,33 +232,35 @@
| Phase | Start | End | Duration | Status |
|-------|-------|-----|----------|--------|
| Phase 1 | 2025-Q4 | 2025-Q4 | 3 months | ✅ Complete |
| Phase 2.1-2.5 | 2025-Q4 | 2026-02-15 | 3 months | ✅ Complete |
| Phase 2.6 | 2026-02-15 | 2026-02-20 | 1 week | ✅ Complete |
| Phase 2.7 | 2026-02-20 | 2026-03-08 | 2 weeks | 🚧 91% |
| Phase 2.8 | 2026-03-10 | ~2026-03-31 | 2-3 weeks | 📋 Planned |
| Phase 3 | 2026-Q2 | 2026-Q3 | 3-4 months | 🔮 Planned |
| Phase 4 | 2026-Q4 | 2027 | 6-12 months | 🔮 Future |
| Phase 1 | 2025-Q4 | 2025-Q4 | 3 months | ✅ Implemented |
| Phase 2.1-2.5 | 2025-Q4 | 2026-02-15 | 3 months | ✅ Implemented |
| Phase 2.6 | 2026-02-15 | 2026-02-20 | 1 week | ✅ Implemented |
| Phase 2.7 | 2026-02-20 | 2026-03-08 | 2 weeks | ✅ Implemented |
| Phase 2.8 | 2026-03 | — | — | ✅ Implemented (core) |
| P0/P1 Security + Tests | 2026-06 | — | — | ✅ Implemented |
| Phase 3 | TBD | TBD | 3-4 months | 🚧 Next (frontend) |
| Phase 4 | TBD | TBD | 6-12 months | 🔮 Future |
---
## Milestones
### ✅ Completed
- ✅ **Milestone 1**: Foundation (2025-Q4)
- ✅ **Milestone 2**: Core Features (2026-02-15)
- ✅ **Milestone 3**: Security Hardening (2026-02-20)
- ✅ **Milestone 4**: Health Data Features (2026-03-08, 91%)
- ✅ Foundation (2025-Q4)
- ✅ Core Features — Phases 2.1–2.5 (2026-02-15)
- ✅ Security Hardening — Phase 2.6 (2026-02-20)
- ✅ Health Data Features — Phase 2.7 (2026-03-08)
- ✅ Drug Interactions — Phase 2.8 core
- ✅ P0/P1 Security + Test rewrite
### 🎯 Up Next
- 📋 **Milestone 5**: Drug Interactions & Advanced Features (2026-03-31)
### 🚧 Up Next
- 🚧 Frontend (Phase 3)
### 🔮 Future
- 🔮 **Milestone 6**: Frontend Complete (2026-Q3)
- 🔮 **Milestone 7**: Mobile Apps (2026-Q4)
- 🔮 **Milestone 8**: AI/ML Features (2027)
- 🔮 Phase 2.8 stretch (reminders, analytics, export, caregiver access)
- 🔮 Mobile Apps (Phase 4)
- 🔮 AI/ML Features (Phase 5)
---
*Last Updated: 2026-03-09*
*Next Review: After Phase 2.8 completion*
*Last Updated: 2026-06-27*

137
docs/product/STATUS.md
View file

@ -1,21 +1,25 @@
# Normogen Project Status
## Project Overview
**Project Name**: Normogen (Balanced Life in Mapudungun)
**Goal**: Open-source health data platform for private, secure health data management
**Current Phase**: Phase 2.8 - Drug Interactions & Advanced Features (Planning)
**Last Updated**: 2026-03-09 10:43:00 UTC
**Project Name**: Normogen (Balanced Life in Mapudungun)
**Goal**: Open-source health data platform for private, secure health data management
**Current Phase**: Phase 2.8 — Implemented (drug interactions live). Open work is the frontend (Phase 3).
**Last Updated**: 2026-06-27
---
## 📊 Overall Progress
## 📊 Overall Status
| Component | Progress | Status |
|-----------|----------|--------|
| **Backend** | 91% | 🚧 Active Development |
| **Frontend** | 10% | 🚧 Early Development |
| **Testing** | 85% | ✅ Good Coverage |
| **Deployment** | 100% | ✅ Production Ready |
| Area | Status |
|------|--------|
| **Backend** | ✅ Phase 2.x feature-complete (through drug interactions). Production-deployed on Solaria. |
| **Security** | ✅ Hardening pass complete (token-version validation, refresh-token persistence, fail-fast config, real-IP audit). |
| **Tests** | ✅ 18 unit tests + 13 integration tests (auth + medication flows), CI-gated with a MongoDB service. |
| **Frontend** | 🚧 Early — Login/Register pages + API/store layer exist; router not yet wired; no dashboard. |
| **Deployment** | 🚧 Docker image is built manually (CI can't run DinD on Forgejo); otherwise operational. |
The backend implements every planned 2.x phase. The honest open work is the
**frontend** (Phase 3) and the operational gaps noted at the bottom.
---
@ -103,31 +107,41 @@
---
#### Phase 2.7: Health Data Features 🚧 91% COMPLETE
#### Phase 2.7: Health Data Features ✅ IMPLEMENTED
- [x] Medication management (CRUD operations)
- [x] Medication adherence tracking
- [x] Health statistics tracking (weight, BP, etc.)
- [x] Lab results storage
- [x] OpenFDA API integration for drug data
- [x] Comprehensive test coverage
- [ ] Drug interaction checking (moved to Phase 2.8)
- [ ] Full integration testing (in progress)
**Completed**: 2026-03-08 (91%)
**Completed**: 2026-03-08
---
#### Phase 2.8: Advanced Features & Enhancements 📋 PLANNING (0%)
- [ ] Drug interaction checking
- [ ] Automated reminder system
- [ ] Advanced health analytics
- [ ] Healthcare data export (FHIR, HL7)
- [ ] Medication refill tracking
- [ ] User preferences
- [ ] Caregiver access
#### Phase 2.8: Drug Interactions ✅ IMPLEMENTED
- [x] Drug interaction checking (`/api/interactions/check`, `/check-new`)
- [x] Ingredient mapper
- [x] Interaction service (in-memory interaction data)
- [ ] Automated reminder system *(not yet started)*
- [ ] Advanced health analytics *(not yet started)*
- [ ] Healthcare data export (FHIR, HL7) *(not yet started)*
- [ ] Medication refill tracking *(not yet started)*
- [ ] Caregiver access *(not yet started)*
**Estimated Start**: 2026-03-10
**Estimated Duration**: 2-3 weeks
**Completed (core)**: drug interaction checking is live. The remaining items are
future enhancements; see the [roadmap](./ROADMAP.md).
---
#### P0/P1 Security + Tests ✅ IMPLEMENTED
- [x] `token_version` validation in the JWT middleware (stale tokens rejected after password change)
- [x] Refresh tokens persisted **hashed** in MongoDB (survive restarts; revocable)
- [x] `/api/auth/refresh` (rotation + reuse detection) and `/api/auth/logout`
- [x] Fail-fast config (`APP_ENVIRONMENT=production` rejects insecure `JWT_SECRET`/`ENCRYPTION_KEY`)
- [x] Real client-IP resolution in audit logs (`X-Forwarded-For` → `X-Real-IP` → socket)
- [x] Handler `.unwrap()` cleanup (panics → clean error responses)
- [x] Integration tests rewritten against an isolated test DB
---
@ -182,48 +196,30 @@
## Current Status
**Active Development**: Phase 2.8 - Drug Interactions & Advanced Features
**Backend Status**: 91% complete, production-ready for most features
**Frontend Status**: 10% complete, basic structure exists
**Database**: MongoDB 7.0
**Deployment**: Docker on Solaria (homelab)
**Test Coverage**: 85%
**Backend**: Phase 2.x feature-complete; deployed on Solaria (Docker).
**Frontend**: Early stage — Login/Register pages + API/store layer; router not yet wired.
**Database**: MongoDB 7.0
**Deployment**: Docker on Solaria (homelab); image built manually (not in CI).
**Tests**: 18 unit + 13 integration (auth + medication), CI-gated with MongoDB.
---
## Recent Updates
### Phase 2.7 Progress (2026-03-08)
- ✅ **Completed**: Medication management backend (91%)
- CRUD operations for medications
- Dose logging and adherence tracking
- OpenFDA integration for drug data
- Comprehensive test suite
- 🚧 **In Progress**: Integration testing and documentation
- 📋 **Moved to Phase 2.8**: Drug interaction checking (to be implemented with interactions handler)
### Phase 2.6 Complete (2026-02-20)
- ✅ **Security Hardening Complete**
- Rate limiting with tower-governor
- Account lockout policies
- Security audit logging
- Session management API
### Known security gaps (tracked, not in current scope)
- Rate limiting middleware is a stub (deferred).
- A few borderline `.unwrap()` calls remain in repository `inserted_id` paths.
---
## Tech Stack
### Backend
- **Language**: Rust 1.93
- **Language**: Rust (edition 2021)
- **Framework**: Axum 0.7 (async web framework)
- **Database**: MongoDB 7.0
- **Authentication**: JWT (jsonwebtoken 9)
- Access tokens: 15 minute expiry
- Refresh tokens: 30 day expiry
- Access tokens: default 15 minute expiry (configurable)
- Refresh tokens: default 7 day expiry (configurable); stored hashed in MongoDB, rotated, revocable
- **Password Security**: PBKDF2 (100K iterations)
- **Deployment**: Docker, Docker Compose
- **Security**: `token_version` invalidation; account lockout; audit logging with real client-IP resolution
- **Deployment**: Docker, Docker Compose (image built manually)
- **CI/CD**: Forgejo Actions
### Frontend
@ -290,30 +286,22 @@
- ✅ `DELETE /:id` - Delete health stat
- ✅ `GET /trends` - Get trends
### Drug Interactions (`/api/interactions`) *(Phase 2.8)*
- ✅ `POST /check` - Check interactions between a set of medications
- ✅ `POST /check-new` - Check a new medication against existing ones
### Health Check
- ✅ `GET /health` - Health check endpoint
- ✅ `GET /ready` - Readiness check endpoint
---
## Next Milestones
1. 📋 **Phase 2.8** - Drug Interactions & Advanced Features (Planning)
- Drug interaction checking
- Automated reminders
- Advanced analytics
- Data export (FHIR, HL7)
2. 🔮 **Phase 3.0** - Frontend Development (Planned)
- Complete React app
- Dashboard and visualization
- Medication management UI
3. 🔮 **Phase 4.0** - Mobile Development (Future)
- iOS and Android apps
4. 🔮 **Phase 5.0** - Advanced Features (Future)
- AI/ML features
- Third-party integrations
1. 🚧 **Phase 3 — Frontend** — wire the router, build the dashboard and feature UIs.
2. 🔮 **Phase 2.8 follow-ups** — reminders, analytics, data export, caregiver access.
3. 🔮 **Phase 4 — Mobile** — iOS and Android apps.
4. 🔮 **Phase 5 — Advanced** — integrations, AI/ML features.
---
@ -343,6 +331,5 @@ tower-governor = "0.4.3"
---
**Last Updated**: 2026-03-09 10:43:00 UTC
**Next Review**: After Phase 2.8 completion
**Last Updated**: 2026-06-27
**Maintained By**: Project maintainers

21
docs/product/introduction.md
View file

@ -91,7 +91,7 @@ Normogen's revenue will come from **user subscriptions**, not from using or sell
### Technology Stack
#### Backend
- **Language**: Rust 1.93 (performance, safety)
- **Language**: Rust (edition 2021; performance, safety)
- **Framework**: Axum 0.7 (async web framework)
- **Database**: MongoDB 7.0 (flexible document storage)
- **Security**: JWT authentication, PBKDF2 password hashing, AES-256-GCM encryption
@ -190,10 +190,9 @@ Most sensors will have a common interface or data will be accessible through the
## Current Status
**Phase**: 2.8 - Drug Interactions & Advanced Features (Planning)
**Backend**: 91% complete
**Frontend**: 10% complete
**Deployment**: Production-ready (Docker on Solaria)
**Backend**: ✅ Phase 2.x feature-complete (through drug interactions); security-hardened.
**Frontend**: 🚧 Early (Login/Register + API/store layer; router not yet wired).
**Deployment**: Docker on Solaria (image built manually — not in CI).
See [STATUS.md](./STATUS.md) for detailed progress tracking.
@ -201,11 +200,11 @@ See [STATUS.md](./STATUS.md) for detailed progress tracking.
## Roadmap Highlights
### Phase 2.8 (Current - Planning)
- Drug interaction checking
- Automated reminder system
- Advanced health analytics
- Healthcare data export (FHIR, HL7)
### Phase 2.8 (core implemented)
- ✅ Drug interaction checking (`/api/interactions/check`, `/check-new`)
- 🔔 Automated reminder system (not started)
- 📊 Advanced health analytics (not started)
- 📄 Healthcare data export, FHIR/HL7 (not started)
### Phase 3 (Planned - Q2 2026)
- Complete frontend web application
@ -274,4 +273,4 @@ We welcome contributions from developers, designers, and users. See [development
**Last Updated**: 2026-03-09
**Maintained By**: Project maintainers
**Version**: 0.2.8 (Phase 2.8 Planning)
**Version**: 0.2.8 (Phase 2.8 implemented)

90
docs/testing/README.md
View file

@ -1,72 +1,48 @@
# Testing Documentation
This section contains test scripts, test results, and testing documentation.
Test scripts, test notes, and the layout of the automated test suite.
## 🧪 Test Scripts
## Automated test suite (`backend/`)
The authoritative tests live in the backend crate and run via `cargo test`:
- **Unit tests** (`cargo test --lib`) — 18 tests in `src/`: client-IP resolution,
JWT round-trips, refresh-token hashing, token-version cache, services.
- **Integration tests** (`cargo test --test auth_tests --test medication_tests`) —
13 tests in `tests/`, built in-process against an isolated per-run MongoDB
database via the shared `tests/common/mod.rs` helper. They **skip gracefully**
when MongoDB is unreachable, so `cargo test` stays green without a database.
Cover: register, login (right/wrong password), auth enforcement, refresh
rotation + reuse detection, logout, password-change invalidation, and
medication CRUD/auth flows.
To run the integration tests for real, start a MongoDB first:
```bash
docker run -d -p 27017:27017 --name mongo-test mongo:7
cd backend && cargo test --test auth_tests --test medication_tests
```
CI runs the full suite with a `mongo:7` service container — see
[../development/CI-CD.md](../development/CI-CD.md).
## Manual / smoke test scripts
### API Testing
- **[test-api-endpoints.sh](./test-api-endpoints.sh)** - Comprehensive API endpoint testing
- **[test-medication-api.sh](./test-medication-api.sh)** - Medication-specific API tests
- **[test-meds.sh](./test-meds.sh)** - Quick medication tests
### Integration Testing
- **[test-mvp-phase-2.7.sh](./test-mvp-phase-2.7.sh)** - Phase 2.7 MVP comprehensive tests
- **[solaria-test.sh](./solaria-test.sh)** - Solaria deployment testing
- **[check-solaria-logs.sh](./check-solaria-logs.sh)** - Log checking utility
- **[quick-test.sh](./quick-test.sh)** - Fast smoke test
### Quick Tests
- **[quick-test.sh](./quick-test.sh)** - Fast smoke tests
> Historical test-run snapshots are in [../archive/](../archive/README.md).
## 📊 Test Results
## Notes
- **[API_TEST_RESULTS_SOLARIA.md](./API_TEST_RESULTS_SOLARIA.md)** - API test results from Solaria deployment
## 🚀 Running Tests
### Quick Smoke Test
```bash
./docs/testing/quick-test.sh
```
### Full API Test Suite
```bash
./docs/testing/test-api-endpoints.sh
```
### Medication API Tests
```bash
./docs/testing/test-medication-api.sh
```
### Phase 2.7 MVP Tests
```bash
./docs/testing/test-mvp-phase-2.7.sh
```
## 📋 Test Coverage
### Backend Tests
- ✅ Authentication (login, register, token refresh)
- ✅ User management (profile, settings)
- ✅ Permissions & shares
- ✅ Medications (CRUD, logging, adherence)
- ✅ Health statistics
- ✅ Security (rate limiting, session management)
- 🚧 Drug interactions (in progress)
### Test Types
- **Unit Tests**: Rust `cargo test`
- **Integration Tests**: API endpoint tests
- **E2E Tests**: Full workflow tests
- **Deployment Tests**: Post-deployment verification
## 📝 Test Notes
- All tests require MongoDB to be running
- Some tests require valid JWT tokens
- Solaria tests require VPN/connection to Solaria server
- Test data is isolated to prevent conflicts
- Manual scripts that hit a live server need MongoDB running and (for protected
routes) a valid JWT.
- Solaria tests require network access to the Solaria server.
---
*Last Updated: 2026-03-09*
*Last Updated: 2026-06-27*

6
docs/testing/test-meds.sh
View file

@ -1,6 +0,0 @@
#!/bin/bash
echo "Testing Medication API"
curl -s http://solaria.solivarez.com.ar:8001/health
echo ""
echo "Registering user..."
curl -s -X POST http://solaria.solivarez.com.ar:8001/api/auth/register -H "Content-Type: application/json" -d '{"email":"medtest@example.com","username":"medtest","password":"Password123!","first_name":"Test","last_name":"User"}'